Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 AC084018.2-201ENST00000613093 2607 ntBASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 KRT18P6-201ENST00000555540 1265 ntBASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 SLC25A1P4-201ENST00000567977 778 ntBASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC01561Q8N1V8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 AL645608.8-201ENST00000606034 2086 ntBASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 AC133963.1-201ENST00000504166 1679 ntBASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 C1QBPP2-201ENST00000528754 825 ntBASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 AL121761.2-201ENST00000598007 1648 ntBASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC01561Q8N1V8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms