Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
XRN1Q8IZH2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
XRN1Q8IZH2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
XRN1Q8IZH2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC25■■□□□ 1.59
XRN1Q8IZH2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
XRN1Q8IZH2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC25■■□□□ 1.59
XRN1Q8IZH2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC25■■□□□ 1.59
XRN1Q8IZH2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
XRN1Q8IZH2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC25■■□□□ 1.59
XRN1Q8IZH2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC25■■□□□ 1.59
XRN1Q8IZH2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC25■■□□□ 1.59
XRN1Q8IZH2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC25■■□□□ 1.59
XRN1Q8IZH2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC25■■□□□ 1.59
XRN1Q8IZH2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
XRN1Q8IZH2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
XRN1Q8IZH2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC25■■□□□ 1.59
XRN1Q8IZH2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 TSEN15P1-201ENST00000423257 515 ntBASIC24.99■■□□□ 1.59
XRN1Q8IZH2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 AC073592.5-201ENST00000624854 528 ntBASIC24.99■■□□□ 1.59
XRN1Q8IZH2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC24.99■■□□□ 1.59
XRN1Q8IZH2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
XRN1Q8IZH2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 AL645939.2-201ENST00000427340 991 ntBASIC24.98■■□□□ 1.59
XRN1Q8IZH2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 AP002472.1-201ENST00000577490 586 ntBASIC24.98■■□□□ 1.59
XRN1Q8IZH2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 FAM8A3P-201ENST00000427218 844 ntBASIC24.98■■□□□ 1.59
XRN1Q8IZH2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 SNHG9-202ENST00000564014 471 ntBASIC24.98■■□□□ 1.59
XRN1Q8IZH2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
XRN1Q8IZH2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 RPS15P9-201ENST00000494093 319 ntBASIC24.97■■□□□ 1.59
XRN1Q8IZH2 IGHV3-65-201ENST00000523210 341 ntBASIC24.97■■□□□ 1.59
XRN1Q8IZH2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 AC093010.1-201ENST00000473625 1624 ntBASIC24.97■■□□□ 1.59
XRN1Q8IZH2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
XRN1Q8IZH2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
XRN1Q8IZH2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms