Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC135776.1-201ENST00000319817 2481 ntBASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM4Q86VH4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 AC132938.6-201ENST00000623828 1655 ntBASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 AP000867.3-201ENST00000524675 377 ntBASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM4Q86VH4 AC009113.1-201ENST00000570267 2443 ntBASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 AC104581.1-202ENST00000635932 2618 ntBASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 AL096828.2-201ENST00000567259 1965 ntBASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 AC246785.2-201ENST00000432512 513 ntBASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 AC068472.1-201ENST00000474589 881 ntBASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 MIR3652-201ENST00000579335 131 ntBASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 Z69720.1-201ENST00000601483 472 ntBASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 AC233702.3-201ENST00000578656 1387 ntBASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM4Q86VH4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 AC012615.1-201ENST00000565797 1299 ntBASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LRRTM4Q86VH4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms