Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LDB1Q86U70 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
LDB1Q86U70 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
LDB1Q86U70 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.1■□□□□ 0.49
LDB1Q86U70 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.1■□□□□ 0.49
LDB1Q86U70 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LDB1Q86U70 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LDB1Q86U70 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
LDB1Q86U70 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LDB1Q86U70 BX664615.1-201ENST00000443558 458 ntBASIC18.1■□□□□ 0.49
LDB1Q86U70 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.1■□□□□ 0.49
LDB1Q86U70 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LDB1Q86U70 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LDB1Q86U70 AC006011.2-201ENST00000621313 1158 ntBASIC18.1■□□□□ 0.49
LDB1Q86U70 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LDB1Q86U70 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.1■□□□□ 0.49
LDB1Q86U70 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LDB1Q86U70 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LDB1Q86U70 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LDB1Q86U70 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LDB1Q86U70 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.09■□□□□ 0.49
LDB1Q86U70 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
LDB1Q86U70 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 FLJ13224-201ENST00000313737 1514 ntBASIC18.09■□□□□ 0.49
LDB1Q86U70 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LDB1Q86U70 AC134043.2-201ENST00000624206 2238 ntBASIC18.09■□□□□ 0.49
LDB1Q86U70 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 PVRIG2P-201ENST00000435460 978 ntBASIC18.09■□□□□ 0.49
LDB1Q86U70 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.09■□□□□ 0.49
LDB1Q86U70 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.09■□□□□ 0.49
LDB1Q86U70 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.09■□□□□ 0.49
LDB1Q86U70 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.09■□□□□ 0.49
LDB1Q86U70 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LDB1Q86U70 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 AC132938.6-201ENST00000623828 1655 ntBASIC18.09■□□□□ 0.49
LDB1Q86U70 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LDB1Q86U70 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LDB1Q86U70 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
LDB1Q86U70 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LDB1Q86U70 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LDB1Q86U70 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LDB1Q86U70 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LDB1Q86U70 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.08■□□□□ 0.49
LDB1Q86U70 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LDB1Q86U70 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LDB1Q86U70 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
LDB1Q86U70 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LDB1Q86U70 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LDB1Q86U70 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LDB1Q86U70 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LDB1Q86U70 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.08■□□□□ 0.48
LDB1Q86U70 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.08■□□□□ 0.48
LDB1Q86U70 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.08■□□□□ 0.48
LDB1Q86U70 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LDB1Q86U70 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LDB1Q86U70 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
LDB1Q86U70 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.08■□□□□ 0.48
LDB1Q86U70 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
LDB1Q86U70 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LDB1Q86U70 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LDB1Q86U70 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LDB1Q86U70 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.08■□□□□ 0.48
LDB1Q86U70 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LDB1Q86U70 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LDB1Q86U70 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LDB1Q86U70 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LDB1Q86U70 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.08■□□□□ 0.48
LDB1Q86U70 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
LDB1Q86U70 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms