Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 KRT18P2-201ENST00000447938 1258 ntBASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 RNA5SP416-201ENST00000516838 111 ntBASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 AC105339.3-201ENST00000560043 636 ntBASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 LINC01126-201ENST00000623515 1646 ntBASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 COX20P2-201ENST00000452636 358 ntBASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 AC109322.1-201ENST00000524499 1264 ntBASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 AC073592.4-201ENST00000623827 446 ntBASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 PDPK2P-202ENST00000562415 1191 ntBASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 AC092364.2-202ENST00000597012 1073 ntBASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VPS13BQ7Z7G8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 AC064836.3-201ENST00000607928 673 ntBASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 AC107918.4-202ENST00000641623 219 ntBASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 AC002310.6-201ENST00000624451 1377 ntBASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms