Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 AC139887.4-201ENST00000607877 719 ntBASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 AC092865.7-201ENST00000641832 219 ntBASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.29■□□□□ 0.2
NHLRC1Q6VVB1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 AL096828.2-201ENST00000567259 1965 ntBASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 LIN28AP1-201ENST00000429574 405 ntBASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 YBX1P2-201ENST00000489612 999 ntBASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 AC006011.2-201ENST00000621313 1158 ntBASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 AC079602.3-201ENST00000623931 403 ntBASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
NHLRC1Q6VVB1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 AC093010.1-201ENST00000473625 1624 ntBASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 AC104076.2-201ENST00000448912 469 ntBASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 AC140113.3-201ENST00000605663 199 ntBASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.27■□□□□ 0.2
NHLRC1Q6VVB1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
NHLRC1Q6VVB1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.27■□□□□ 0.19
NHLRC1Q6VVB1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NHLRC1Q6VVB1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NHLRC1Q6VVB1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.27■□□□□ 0.19
NHLRC1Q6VVB1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.27■□□□□ 0.19
NHLRC1Q6VVB1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NHLRC1Q6VVB1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NHLRC1Q6VVB1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NHLRC1Q6VVB1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
NHLRC1Q6VVB1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NHLRC1Q6VVB1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NHLRC1Q6VVB1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.26■□□□□ 0.19
NHLRC1Q6VVB1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NHLRC1Q6VVB1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NHLRC1Q6VVB1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms