Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 AP000997.3-201ENST00000623333 2250 ntBASIC22.18■■□□□ 1.14
CASC1Q6TDU7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 AC093010.1-201ENST00000473625 1624 ntBASIC22.18■■□□□ 1.14
CASC1Q6TDU7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 NAPSB-206ENST00000562112 1266 ntBASIC22.18■■□□□ 1.14
CASC1Q6TDU7 AL512604.3-201ENST00000569583 964 ntBASIC22.18■■□□□ 1.14
CASC1Q6TDU7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CASC1Q6TDU7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 CYP2D8P-201ENST00000433633 1490 ntBASIC22.17■■□□□ 1.14
CASC1Q6TDU7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CASC1Q6TDU7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 AC010240.3-201ENST00000607688 395 ntBASIC22.16■■□□□ 1.14
CASC1Q6TDU7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.16■■□□□ 1.14
CASC1Q6TDU7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CASC1Q6TDU7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 AC010947.1-201ENST00000623454 693 ntBASIC22.15■■□□□ 1.14
CASC1Q6TDU7 LINC01126-201ENST00000623515 1646 ntBASIC22.15■■□□□ 1.14
CASC1Q6TDU7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CASC1Q6TDU7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms