Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 AC087289.5-201ENST00000586076 3175 ntBASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 AC079781.3-201ENST00000449110 356 ntBASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 AC104692.2-201ENST00000603054 253 ntBASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC27A1Q6PCB7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 AC011467.2-201ENST00000598425 242 ntBASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
SLC27A1Q6PCB7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 KRT8P10-201ENST00000450021 1447 ntBASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 DUTP2-201ENST00000519164 463 ntBASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 AL160237.2-201ENST00000556165 472 ntBASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 AL121912.1-201ENST00000603683 238 ntBASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 AC093677.2-201ENST00000600169 1863 ntBASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 AL096828.2-201ENST00000567259 1965 ntBASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC27A1Q6PCB7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC27A1Q6PCB7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC27A1Q6PCB7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.52■□□□□ 0.72
SLC27A1Q6PCB7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.52■□□□□ 0.72
SLC27A1Q6PCB7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC27A1Q6PCB7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC27A1Q6PCB7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC27A1Q6PCB7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.52■□□□□ 0.72
SLC27A1Q6PCB7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC27A1Q6PCB7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SLC27A1Q6PCB7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC27A1Q6PCB7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC27A1Q6PCB7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms