Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 TUBB8P6-201ENST00000436895 1288 ntBASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 UNC93B5-201ENST00000530315 699 ntBASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 AC104417.2-201ENST00000562989 1793 ntBASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFI1BQ5VTD9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 PCDHB17P-201ENST00000539533 2393 ntBASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 POM121L13P-201ENST00000422362 380 ntBASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 SDHAP1-207ENST00000440850 2000 ntBASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFI1BQ5VTD9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 AC105020.1-201ENST00000435356 2205 ntBASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 SLC25A6P5-201ENST00000435663 894 ntBASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.22□□□□□ -0.13
GFI1BQ5VTD9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms