Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
LRRC38Q5VT99 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 SLC25A3P1-201ENST00000443844 931 ntBASIC18.82■□□□□ 0.6
LRRC38Q5VT99 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 AC066615.1-201ENST00000640911 628 ntBASIC18.82■□□□□ 0.6
LRRC38Q5VT99 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC38Q5VT99 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 AL031432.5-201ENST00000641059 760 ntBASIC18.81■□□□□ 0.6
LRRC38Q5VT99 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 AC020916.1-201ENST00000587762 1774 ntBASIC18.81■□□□□ 0.6
LRRC38Q5VT99 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC38Q5VT99 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC38Q5VT99 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms