Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CTC1Q2NKJ3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 PMS2P2-201ENST00000425039 1128 ntBASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 AC027601.4-201ENST00000611259 610 ntBASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 FAM197Y3-203ENST00000618346 717 ntBASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.35■□□□□ 0.69
CTC1Q2NKJ3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 TEX21P-204ENST00000641479 1693 ntBASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 RCN1P2-201ENST00000398357 915 ntBASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTC1Q2NKJ3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTC1Q2NKJ3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CTC1Q2NKJ3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CTC1Q2NKJ3 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.33■□□□□ 0.69
CTC1Q2NKJ3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CTC1Q2NKJ3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTC1Q2NKJ3 AC022898.2-201ENST00000616822 1312 ntBASIC19.33■□□□□ 0.69
CTC1Q2NKJ3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.33■□□□□ 0.69
CTC1Q2NKJ3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTC1Q2NKJ3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTC1Q2NKJ3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 RPSAP43-201ENST00000402237 625 ntBASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 MTDHP3-201ENST00000594186 672 ntBASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 AP001160.2-201ENST00000596071 487 ntBASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTC1Q2NKJ3 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.32■□□□□ 0.68
CTC1Q2NKJ3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTC1Q2NKJ3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTC1Q2NKJ3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.32■□□□□ 0.68
CTC1Q2NKJ3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CTC1Q2NKJ3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms