Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.29□□□□□ -0.12
CCL20P78556 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL20P78556 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCL20P78556 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.29□□□□□ -0.12
CCL20P78556 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 PCDHB17P-201ENST00000539533 2393 ntBASIC14.29□□□□□ -0.12
CCL20P78556 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 AC099343.3-201ENST00000605834 2503 ntBASIC14.29□□□□□ -0.12
CCL20P78556 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL20P78556 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCL20P78556 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CCL20P78556 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCL20P78556 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CCL20P78556 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCL20P78556 LSM12P1-201ENST00000411836 588 ntBASIC14.28□□□□□ -0.12
CCL20P78556 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL20P78556 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL20P78556 AC133963.1-201ENST00000504166 1679 ntBASIC14.28□□□□□ -0.12
CCL20P78556 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL20P78556 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL20P78556 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL20P78556 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCL20P78556 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CCL20P78556 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.28□□□□□ -0.12
CCL20P78556 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCL20P78556 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCL20P78556 AC008406.3-201ENST00000620001 1374 ntBASIC14.28□□□□□ -0.12
CCL20P78556 AC092437.1-201ENST00000624794 1048 ntBASIC14.28□□□□□ -0.12
CCL20P78556 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCL20P78556 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCL20P78556 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL20P78556 AC132872.4-202ENST00000622924 2756 ntBASIC14.28□□□□□ -0.12
CCL20P78556 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL20P78556 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL20P78556 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.27□□□□□ -0.12
CCL20P78556 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL20P78556 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL20P78556 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL20P78556 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CCL20P78556 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.27□□□□□ -0.12
CCL20P78556 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.27□□□□□ -0.12
CCL20P78556 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.27□□□□□ -0.12
CCL20P78556 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL20P78556 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CCL20P78556 KRT8P3-201ENST00000519669 1449 ntBASIC14.27□□□□□ -0.12
CCL20P78556 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL20P78556 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL20P78556 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCL20P78556 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL20P78556 AC093787.1-201ENST00000450396 207 ntBASIC14.27□□□□□ -0.13
CCL20P78556 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL20P78556 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL20P78556 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL20P78556 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CCL20P78556 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL20P78556 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL20P78556 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL20P78556 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL20P78556 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL20P78556 CROCCP1-201ENST00000426910 5675 ntBASIC14.27□□□□□ -0.13
CCL20P78556 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms