Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ATN1P54259 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.91■□□□□ 0.78
ATN1P54259 AC108359.1-201ENST00000616451 1211 ntBASIC19.91■□□□□ 0.78
ATN1P54259 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ATN1P54259 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.91■□□□□ 0.78
ATN1P54259 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATN1P54259 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ATN1P54259 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATN1P54259 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.9■□□□□ 0.78
ATN1P54259 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.9■□□□□ 0.78
ATN1P54259 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.9■□□□□ 0.78
ATN1P54259 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ATN1P54259 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATN1P54259 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ATN1P54259 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ATN1P54259 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ATN1P54259 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATN1P54259 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
ATN1P54259 YBX1P5-201ENST00000509441 847 ntBASIC19.9■□□□□ 0.78
ATN1P54259 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.9■□□□□ 0.78
ATN1P54259 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.9■□□□□ 0.78
ATN1P54259 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ATN1P54259 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.9■□□□□ 0.78
ATN1P54259 AL022326.1-202ENST00000641533 845 ntBASIC19.9■□□□□ 0.78
ATN1P54259 AC092865.6-201ENST00000642101 219 ntBASIC19.9■□□□□ 0.78
ATN1P54259 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATN1P54259 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATN1P54259 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATN1P54259 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.9■□□□□ 0.78
ATN1P54259 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.9■□□□□ 0.78
ATN1P54259 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.9■□□□□ 0.78
ATN1P54259 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATN1P54259 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ATN1P54259 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.9■□□□□ 0.78
ATN1P54259 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATN1P54259 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATN1P54259 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATN1P54259 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATN1P54259 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATN1P54259 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATN1P54259 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATN1P54259 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATN1P54259 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATN1P54259 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ATN1P54259 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.89■□□□□ 0.77
ATN1P54259 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.89■□□□□ 0.77
ATN1P54259 AC254562.1-201ENST00000417586 456 ntBASIC19.89■□□□□ 0.77
ATN1P54259 KRT18P27-201ENST00000427733 1299 ntBASIC19.89■□□□□ 0.77
ATN1P54259 CNN2P11-201ENST00000429351 262 ntBASIC19.89■□□□□ 0.77
ATN1P54259 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ATN1P54259 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.89■□□□□ 0.77
ATN1P54259 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATN1P54259 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATN1P54259 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATN1P54259 AC112698.1-201ENST00000510299 916 ntBASIC19.89■□□□□ 0.77
ATN1P54259 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATN1P54259 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ATN1P54259 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATN1P54259 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.88■□□□□ 0.77
ATN1P54259 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ATN1P54259 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
ATN1P54259 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ATN1P54259 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ATN1P54259 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.88■□□□□ 0.77
ATN1P54259 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
ATN1P54259 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.88■□□□□ 0.77
ATN1P54259 KATNBL1P2-201ENST00000433311 835 ntBASIC19.88■□□□□ 0.77
ATN1P54259 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.88■□□□□ 0.77
ATN1P54259 KRT18P65-201ENST00000439811 1286 ntBASIC19.88■□□□□ 0.77
ATN1P54259 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
ATN1P54259 AC006557.2-201ENST00000592985 1240 ntBASIC19.88■□□□□ 0.77
ATN1P54259 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.88■□□□□ 0.77
ATN1P54259 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.88■□□□□ 0.77
ATN1P54259 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.88■□□□□ 0.77
ATN1P54259 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.88■□□□□ 0.77
ATN1P54259 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ATN1P54259 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ATN1P54259 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATN1P54259 AL158211.5-201ENST00000623583 2518 ntBASIC19.87■□□□□ 0.77
ATN1P54259 AC079776.2-201ENST00000641154 1609 ntBASIC19.87■□□□□ 0.77
ATN1P54259 MYLKP1-201ENST00000509077 1580 ntBASIC19.87■□□□□ 0.77
ATN1P54259 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.87■□□□□ 0.77
ATN1P54259 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATN1P54259 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.87■□□□□ 0.77
ATN1P54259 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.87■□□□□ 0.77
ATN1P54259 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATN1P54259 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms