Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.34■□□□□ 0.85
LBX1P52954 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.34■□□□□ 0.85
LBX1P52954 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LBX1P52954 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.34■□□□□ 0.85
LBX1P52954 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.34■□□□□ 0.85
LBX1P52954 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.34■□□□□ 0.85
LBX1P52954 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.34■□□□□ 0.85
LBX1P52954 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
LBX1P52954 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.34■□□□□ 0.85
LBX1P52954 NCF1C-201ENST00000438382 1427 ntBASIC20.34■□□□□ 0.85
LBX1P52954 AC092919.2-201ENST00000623631 1645 ntBASIC20.34■□□□□ 0.85
LBX1P52954 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LBX1P52954 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.34■□□□□ 0.85
LBX1P52954 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.33■□□□□ 0.85
LBX1P52954 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.33■□□□□ 0.85
LBX1P52954 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.33■□□□□ 0.85
LBX1P52954 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LBX1P52954 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LBX1P52954 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LBX1P52954 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LBX1P52954 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LBX1P52954 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.33■□□□□ 0.85
LBX1P52954 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.33■□□□□ 0.85
LBX1P52954 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
LBX1P52954 KRT18P65-201ENST00000439811 1286 ntBASIC20.33■□□□□ 0.85
LBX1P52954 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LBX1P52954 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.33■□□□□ 0.85
LBX1P52954 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.33■□□□□ 0.85
LBX1P52954 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.33■□□□□ 0.85
LBX1P52954 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.33■□□□□ 0.85
LBX1P52954 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
LBX1P52954 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
LBX1P52954 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LBX1P52954 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LBX1P52954 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LBX1P52954 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.33■□□□□ 0.84
LBX1P52954 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LBX1P52954 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LBX1P52954 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
LBX1P52954 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LBX1P52954 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBX1P52954 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LBX1P52954 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
LBX1P52954 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.32■□□□□ 0.84
LBX1P52954 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LBX1P52954 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LBX1P52954 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBX1P52954 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBX1P52954 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.32■□□□□ 0.84
LBX1P52954 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.32■□□□□ 0.84
LBX1P52954 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.32■□□□□ 0.84
LBX1P52954 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.32■□□□□ 0.84
LBX1P52954 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.32■□□□□ 0.84
LBX1P52954 AC017083.2-201ENST00000608069 979 ntBASIC20.32■□□□□ 0.84
LBX1P52954 AC026120.1-201ENST00000611536 926 ntBASIC20.32■□□□□ 0.84
LBX1P52954 AP001059.3-201ENST00000619053 235 ntBASIC20.32■□□□□ 0.84
LBX1P52954 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBX1P52954 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LBX1P52954 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBX1P52954 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.32■□□□□ 0.84
LBX1P52954 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LBX1P52954 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBX1P52954 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBX1P52954 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.32■□□□□ 0.84
LBX1P52954 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 AC009102.3-201ENST00000623118 1491 ntBASIC20.31■□□□□ 0.84
LBX1P52954 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 FEM1AP3-201ENST00000403722 1741 ntBASIC20.31■□□□□ 0.84
LBX1P52954 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
LBX1P52954 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.31■□□□□ 0.84
LBX1P52954 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LBX1P52954 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.31■□□□□ 0.84
LBX1P52954 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.31■□□□□ 0.84
LBX1P52954 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.31■□□□□ 0.84
LBX1P52954 AC112191.1-201ENST00000523689 701 ntBASIC20.31■□□□□ 0.84
LBX1P52954 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.31■□□□□ 0.84
LBX1P52954 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBX1P52954 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.31■□□□□ 0.84
LBX1P52954 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms