Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
EFNA3P52797 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.95■□□□□ 0.3
EFNA3P52797 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EFNA3P52797 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
EFNA3P52797 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
EFNA3P52797 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.94■□□□□ 0.3
EFNA3P52797 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.94■□□□□ 0.3
EFNA3P52797 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.94■□□□□ 0.3
EFNA3P52797 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 KRT17P6-201ENST00000453795 1220 ntBASIC16.94■□□□□ 0.3
EFNA3P52797 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.94■□□□□ 0.3
EFNA3P52797 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 AC012615.1-201ENST00000565797 1299 ntBASIC16.94■□□□□ 0.3
EFNA3P52797 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.94■□□□□ 0.3
EFNA3P52797 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
EFNA3P52797 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.94■□□□□ 0.3
EFNA3P52797 AC135776.1-201ENST00000319817 2481 ntBASIC16.94■□□□□ 0.3
EFNA3P52797 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
EFNA3P52797 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
EFNA3P52797 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.94■□□□□ 0.3
EFNA3P52797 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EFNA3P52797 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.93■□□□□ 0.3
EFNA3P52797 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.93■□□□□ 0.3
EFNA3P52797 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.93■□□□□ 0.3
EFNA3P52797 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.93■□□□□ 0.3
EFNA3P52797 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.93■□□□□ 0.3
EFNA3P52797 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.93■□□□□ 0.3
EFNA3P52797 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
EFNA3P52797 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 AC093677.2-201ENST00000600169 1863 ntBASIC16.93■□□□□ 0.3
EFNA3P52797 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
EFNA3P52797 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
EFNA3P52797 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
EFNA3P52797 TSPY12P-201ENST00000421279 868 ntBASIC16.93■□□□□ 0.3
EFNA3P52797 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
EFNA3P52797 FOSL1P1-201ENST00000511041 816 ntBASIC16.93■□□□□ 0.3
EFNA3P52797 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.93■□□□□ 0.3
EFNA3P52797 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.93■□□□□ 0.3
EFNA3P52797 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 PRELID1P1-202ENST00000567272 903 ntBASIC16.93■□□□□ 0.3
EFNA3P52797 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.93■□□□□ 0.3
EFNA3P52797 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
EFNA3P52797 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.93■□□□□ 0.3
EFNA3P52797 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
EFNA3P52797 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EFNA3P52797 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.92■□□□□ 0.3
EFNA3P52797 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.92■□□□□ 0.3
EFNA3P52797 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFNA3P52797 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFNA3P52797 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFNA3P52797 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.92■□□□□ 0.3
EFNA3P52797 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFNA3P52797 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFNA3P52797 NSUN5P1-202ENST00000421140 1535 ntBASIC16.92■□□□□ 0.3
EFNA3P52797 NSUN5P2-203ENST00000457352 1529 ntBASIC16.92■□□□□ 0.3
EFNA3P52797 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
EFNA3P52797 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
EFNA3P52797 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EFNA3P52797 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFNA3P52797 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.92■□□□□ 0.3
EFNA3P52797 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EFNA3P52797 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.92■□□□□ 0.3
EFNA3P52797 TSPY19P-201ENST00000418461 509 ntBASIC16.92■□□□□ 0.3
EFNA3P52797 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.92■□□□□ 0.3
EFNA3P52797 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.92■□□□□ 0.3
EFNA3P52797 TSPY18P-201ENST00000441642 509 ntBASIC16.92■□□□□ 0.3
EFNA3P52797 NUS1P1-201ENST00000446295 882 ntBASIC16.92■□□□□ 0.3
EFNA3P52797 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.92■□□□□ 0.3
EFNA3P52797 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.92■□□□□ 0.3
EFNA3P52797 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
EFNA3P52797 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.92■□□□□ 0.3
EFNA3P52797 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms