Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CLCNKAP51800 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCNKAP51800 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCNKAP51800 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCNKAP51800 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CLCNKAP51800 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CLCNKAP51800 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCNKAP51800 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCNKAP51800 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCNKAP51800 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCNKAP51800 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCNKAP51800 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCNKAP51800 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CLCNKAP51800 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCNKAP51800 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CLCNKAP51800 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCNKAP51800 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCNKAP51800 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCNKAP51800 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 AC090164.3-201ENST00000610780 2143 ntBASIC17.74■□□□□ 0.43
CLCNKAP51800 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
CLCNKAP51800 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCNKAP51800 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.74■□□□□ 0.43
CLCNKAP51800 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCNKAP51800 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 TSPY12P-201ENST00000421279 868 ntBASIC17.74■□□□□ 0.43
CLCNKAP51800 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCNKAP51800 TOB2P1-201ENST00000469761 992 ntBASIC17.74■□□□□ 0.43
CLCNKAP51800 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCNKAP51800 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLCNKAP51800 AC012615.1-201ENST00000565797 1299 ntBASIC17.74■□□□□ 0.43
CLCNKAP51800 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 AC009154.2-201ENST00000621177 724 ntBASIC17.74■□□□□ 0.43
CLCNKAP51800 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCNKAP51800 LINC00602-201ENST00000629776 2065 ntBASIC17.74■□□□□ 0.43
CLCNKAP51800 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 AC233702.3-201ENST00000578656 1387 ntBASIC17.74■□□□□ 0.43
CLCNKAP51800 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCNKAP51800 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CLCNKAP51800 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLCNKAP51800 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCNKAP51800 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CLCNKAP51800 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLCNKAP51800 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCNKAP51800 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CLCNKAP51800 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CLCNKAP51800 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLCNKAP51800 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.73■□□□□ 0.43
CLCNKAP51800 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLCNKAP51800 DUSP5P1-201ENST00000441325 1139 ntBASIC17.73■□□□□ 0.43
CLCNKAP51800 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCNKAP51800 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCNKAP51800 KRT126P-201ENST00000549467 1181 ntBASIC17.73■□□□□ 0.43
CLCNKAP51800 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.73■□□□□ 0.43
CLCNKAP51800 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCNKAP51800 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 Z69720.1-201ENST00000601483 472 ntBASIC17.73■□□□□ 0.43
CLCNKAP51800 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCNKAP51800 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CLCNKAP51800 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCNKAP51800 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CLCNKAP51800 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCNKAP51800 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLCNKAP51800 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCNKAP51800 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CLCNKAP51800 LINC00167-201ENST00000530583 1419 ntBASIC17.72■□□□□ 0.43
CLCNKAP51800 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCNKAP51800 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLCNKAP51800 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.72■□□□□ 0.43
CLCNKAP51800 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.72■□□□□ 0.43
CLCNKAP51800 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLCNKAP51800 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms