Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SRP9P49458 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.12■□□□□ 0.17
SRP9P49458 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
SRP9P49458 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.11■□□□□ 0.17
SRP9P49458 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.11■□□□□ 0.17
SRP9P49458 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.11■□□□□ 0.17
SRP9P49458 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
SRP9P49458 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SRP9P49458 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.11■□□□□ 0.17
SRP9P49458 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.11■□□□□ 0.17
SRP9P49458 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 AC138028.4-201ENST00000564984 1845 ntBASIC16.11■□□□□ 0.17
SRP9P49458 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.11■□□□□ 0.17
SRP9P49458 AL390955.1-201ENST00000428694 934 ntBASIC16.11■□□□□ 0.17
SRP9P49458 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.11■□□□□ 0.17
SRP9P49458 TSPY15P-201ENST00000457163 923 ntBASIC16.11■□□□□ 0.17
SRP9P49458 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.11■□□□□ 0.17
SRP9P49458 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.11■□□□□ 0.17
SRP9P49458 NAPSB-206ENST00000562112 1266 ntBASIC16.11■□□□□ 0.17
SRP9P49458 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.11■□□□□ 0.17
SRP9P49458 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
SRP9P49458 AC073912.3-201ENST00000624414 853 ntBASIC16.11■□□□□ 0.17
SRP9P49458 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
SRP9P49458 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.11■□□□□ 0.17
SRP9P49458 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SRP9P49458 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.11■□□□□ 0.17
SRP9P49458 AC008894.3-201ENST00000624324 3103 ntBASIC16.11■□□□□ 0.17
SRP9P49458 AD000864.1-201ENST00000624076 2295 ntBASIC16.11■□□□□ 0.17
SRP9P49458 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SRP9P49458 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.11■□□□□ 0.17
SRP9P49458 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.1■□□□□ 0.17
SRP9P49458 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.1■□□□□ 0.17
SRP9P49458 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.1■□□□□ 0.17
SRP9P49458 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
SRP9P49458 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 SLC25A1P2-201ENST00000430693 912 ntBASIC16.1■□□□□ 0.17
SRP9P49458 CCR12P-201ENST00000446203 998 ntBASIC16.1■□□□□ 0.17
SRP9P49458 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.1■□□□□ 0.17
SRP9P49458 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.1■□□□□ 0.17
SRP9P49458 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.1■□□□□ 0.17
SRP9P49458 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
SRP9P49458 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
SRP9P49458 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.1■□□□□ 0.17
SRP9P49458 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SRP9P49458 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
SRP9P49458 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SRP9P49458 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.1■□□□□ 0.17
SRP9P49458 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SRP9P49458 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SRP9P49458 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SRP9P49458 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
SRP9P49458 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.09■□□□□ 0.17
SRP9P49458 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SRP9P49458 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.09■□□□□ 0.17
SRP9P49458 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 AC128688.1-201ENST00000487626 519 ntBASIC16.09■□□□□ 0.17
SRP9P49458 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SRP9P49458 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SRP9P49458 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms