Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 AC136632.2-201ENST00000512891 861 ntBASIC20.34■□□□□ 0.85
CENPFP49454 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.34■□□□□ 0.85
CENPFP49454 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.34■□□□□ 0.85
CENPFP49454 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CENPFP49454 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.34■□□□□ 0.85
CENPFP49454 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.34■□□□□ 0.85
CENPFP49454 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.34■□□□□ 0.85
CENPFP49454 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CENPFP49454 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.34■□□□□ 0.85
CENPFP49454 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CENPFP49454 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.34■□□□□ 0.85
CENPFP49454 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.34■□□□□ 0.85
CENPFP49454 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.34■□□□□ 0.85
CENPFP49454 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CENPFP49454 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CENPFP49454 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CENPFP49454 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CENPFP49454 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.33■□□□□ 0.85
CENPFP49454 HCG4B-203ENST00000450128 991 ntBASIC20.33■□□□□ 0.85
CENPFP49454 AP000344.2-201ENST00000512987 629 ntBASIC20.33■□□□□ 0.85
CENPFP49454 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.33■□□□□ 0.85
CENPFP49454 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CENPFP49454 AC018845.2-201ENST00000568326 409 ntBASIC20.33■□□□□ 0.85
CENPFP49454 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CENPFP49454 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CENPFP49454 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CENPFP49454 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CENPFP49454 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.33■□□□□ 0.84
CENPFP49454 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CENPFP49454 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.33■□□□□ 0.84
CENPFP49454 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.33■□□□□ 0.84
CENPFP49454 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.33■□□□□ 0.84
CENPFP49454 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.84
CENPFP49454 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CENPFP49454 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CENPFP49454 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CENPFP49454 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.33■□□□□ 0.84
CENPFP49454 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CENPFP49454 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CENPFP49454 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CENPFP49454 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CENPFP49454 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.32■□□□□ 0.84
CENPFP49454 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.32■□□□□ 0.84
CENPFP49454 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 MEIS3P1-201ENST00000495167 958 ntBASIC20.32■□□□□ 0.84
CENPFP49454 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.32■□□□□ 0.84
CENPFP49454 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.32■□□□□ 0.84
CENPFP49454 AC141586.3-201ENST00000562166 1838 ntBASIC20.32■□□□□ 0.84
CENPFP49454 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.32■□□□□ 0.84
CENPFP49454 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.32■□□□□ 0.84
CENPFP49454 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.32■□□□□ 0.84
CENPFP49454 GAPDHP21-201ENST00000450301 1010 ntBASIC20.32■□□□□ 0.84
CENPFP49454 PAWRP1-201ENST00000451083 565 ntBASIC20.32■□□□□ 0.84
CENPFP49454 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.32■□□□□ 0.84
CENPFP49454 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.32■□□□□ 0.84
CENPFP49454 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.32■□□□□ 0.84
CENPFP49454 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.32■□□□□ 0.84
CENPFP49454 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.32■□□□□ 0.84
CENPFP49454 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPFP49454 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CENPFP49454 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.31■□□□□ 0.84
CENPFP49454 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.31■□□□□ 0.84
CENPFP49454 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CENPFP49454 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CENPFP49454 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CENPFP49454 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.31■□□□□ 0.84
CENPFP49454 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CENPFP49454 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.31■□□□□ 0.84
CENPFP49454 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms