Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.35□□□□□ -0.11
CDC34P49427 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDC34P49427 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDC34P49427 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.34□□□□□ -0.11
CDC34P49427 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CDC34P49427 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDC34P49427 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDC34P49427 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.34□□□□□ -0.11
CDC34P49427 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.34□□□□□ -0.11
CDC34P49427 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.34□□□□□ -0.11
CDC34P49427 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.34□□□□□ -0.11
CDC34P49427 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.34□□□□□ -0.11
CDC34P49427 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.34□□□□□ -0.11
CDC34P49427 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
CDC34P49427 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.34□□□□□ -0.11
CDC34P49427 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.34□□□□□ -0.11
CDC34P49427 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDC34P49427 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDC34P49427 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
CDC34P49427 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC34P49427 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDC34P49427 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.33□□□□□ -0.11
CDC34P49427 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
CDC34P49427 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDC34P49427 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.33□□□□□ -0.11
CDC34P49427 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDC34P49427 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.33□□□□□ -0.11
CDC34P49427 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDC34P49427 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CDC34P49427 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDC34P49427 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDC34P49427 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.33□□□□□ -0.12
CDC34P49427 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CDC34P49427 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDC34P49427 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CDC34P49427 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDC34P49427 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 AP000593.1-201ENST00000393668 712 ntBASIC14.33□□□□□ -0.12
CDC34P49427 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.33□□□□□ -0.12
CDC34P49427 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.33□□□□□ -0.12
CDC34P49427 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 AC091874.3-201ENST00000512672 1195 ntBASIC14.33□□□□□ -0.12
CDC34P49427 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.33□□□□□ -0.12
CDC34P49427 PNMA6B-201ENST00000538162 1200 ntBASIC14.33□□□□□ -0.12
CDC34P49427 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC34P49427 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 AL118508.1-201ENST00000613502 2345 ntBASIC14.33□□□□□ -0.12
CDC34P49427 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.33□□□□□ -0.12
CDC34P49427 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
CDC34P49427 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CDC34P49427 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC34P49427 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC34P49427 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC34P49427 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC34P49427 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDC34P49427 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC34P49427 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC34P49427 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC34P49427 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDC34P49427 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
CDC34P49427 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDC34P49427 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC34P49427 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CDC34P49427 KRT18P55-202ENST00000578578 1546 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms