Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRCC3P46736 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
BRCC3P46736 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.23■□□□□ 0.67
BRCC3P46736 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
BRCC3P46736 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.23■□□□□ 0.67
BRCC3P46736 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
BRCC3P46736 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
BRCC3P46736 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
BRCC3P46736 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.23■□□□□ 0.67
BRCC3P46736 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.23■□□□□ 0.67
BRCC3P46736 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
BRCC3P46736 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.23■□□□□ 0.67
BRCC3P46736 AC009533.2-201ENST00000543664 586 ntBASIC19.23■□□□□ 0.67
BRCC3P46736 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.23■□□□□ 0.67
BRCC3P46736 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.23■□□□□ 0.67
BRCC3P46736 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.23■□□□□ 0.67
BRCC3P46736 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.23■□□□□ 0.67
BRCC3P46736 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.23■□□□□ 0.67
BRCC3P46736 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRCC3P46736 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.22■□□□□ 0.67
BRCC3P46736 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.22■□□□□ 0.67
BRCC3P46736 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BRCC3P46736 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCC3P46736 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.22■□□□□ 0.67
BRCC3P46736 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.22■□□□□ 0.67
BRCC3P46736 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.22■□□□□ 0.67
BRCC3P46736 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCC3P46736 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.22■□□□□ 0.67
BRCC3P46736 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCC3P46736 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCC3P46736 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
BRCC3P46736 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BRCC3P46736 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.22■□□□□ 0.67
BRCC3P46736 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.22■□□□□ 0.67
BRCC3P46736 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.22■□□□□ 0.67
BRCC3P46736 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.22■□□□□ 0.67
BRCC3P46736 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BRCC3P46736 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.22■□□□□ 0.67
BRCC3P46736 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.22■□□□□ 0.67
BRCC3P46736 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.22■□□□□ 0.67
BRCC3P46736 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.22■□□□□ 0.67
BRCC3P46736 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.22■□□□□ 0.67
BRCC3P46736 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
BRCC3P46736 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCC3P46736 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
BRCC3P46736 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.22■□□□□ 0.67
BRCC3P46736 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.22■□□□□ 0.67
BRCC3P46736 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
BRCC3P46736 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCC3P46736 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRCC3P46736 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRCC3P46736 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BRCC3P46736 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRCC3P46736 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRCC3P46736 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
BRCC3P46736 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BRCC3P46736 AP000347.1-202ENST00000435868 847 ntBASIC19.21■□□□□ 0.67
BRCC3P46736 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.21■□□□□ 0.67
BRCC3P46736 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
BRCC3P46736 TNXA-203ENST00000507684 2038 ntBASIC19.21■□□□□ 0.67
BRCC3P46736 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.21■□□□□ 0.67
BRCC3P46736 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BRCC3P46736 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.21■□□□□ 0.67
BRCC3P46736 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.21■□□□□ 0.67
BRCC3P46736 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BRCC3P46736 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
BRCC3P46736 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
BRCC3P46736 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.21■□□□□ 0.67
BRCC3P46736 INTS4P1-201ENST00000438455 1935 ntBASIC19.21■□□□□ 0.67
BRCC3P46736 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.21■□□□□ 0.67
BRCC3P46736 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRCC3P46736 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BRCC3P46736 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
BRCC3P46736 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BRCC3P46736 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRCC3P46736 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
BRCC3P46736 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
BRCC3P46736 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms