Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
CCNFP41002 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.24■□□□□ 0.51
CCNFP41002 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.24■□□□□ 0.51
CCNFP41002 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.24■□□□□ 0.51
CCNFP41002 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.24■□□□□ 0.51
CCNFP41002 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.24■□□□□ 0.51
CCNFP41002 MIR4674-201ENST00000582457 87 ntBASIC18.24■□□□□ 0.51
CCNFP41002 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.24■□□□□ 0.51
CCNFP41002 AC133561.5-201ENST00000635547 218 ntBASIC18.24■□□□□ 0.51
CCNFP41002 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCNFP41002 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.24■□□□□ 0.51
CCNFP41002 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCNFP41002 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.24■□□□□ 0.51
CCNFP41002 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.24■□□□□ 0.51
CCNFP41002 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCNFP41002 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCNFP41002 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCNFP41002 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNFP41002 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCNFP41002 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNFP41002 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNFP41002 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCNFP41002 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNFP41002 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCNFP41002 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CCNFP41002 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.23■□□□□ 0.51
CCNFP41002 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNFP41002 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNFP41002 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNFP41002 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCNFP41002 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNFP41002 ECEL1P2-202ENST00000465689 757 ntBASIC18.23■□□□□ 0.51
CCNFP41002 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.23■□□□□ 0.51
CCNFP41002 WWOX-216ENST00000569818 525 ntBASIC18.23■□□□□ 0.51
CCNFP41002 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNFP41002 FAM87A-204ENST00000613235 858 ntBASIC18.23■□□□□ 0.51
CCNFP41002 AC097493.4-201ENST00000641197 219 ntBASIC18.23■□□□□ 0.51
CCNFP41002 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.23■□□□□ 0.51
CCNFP41002 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.23■□□□□ 0.51
CCNFP41002 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.23■□□□□ 0.51
CCNFP41002 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCNFP41002 PP12613-201ENST00000424958 2230 ntBASIC18.23■□□□□ 0.51
CCNFP41002 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNFP41002 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.23■□□□□ 0.51
CCNFP41002 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CCNFP41002 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNFP41002 KRT18P55-202ENST00000578578 1546 ntBASIC18.23■□□□□ 0.51
CCNFP41002 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNFP41002 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.22■□□□□ 0.51
CCNFP41002 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.22■□□□□ 0.51
CCNFP41002 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.22■□□□□ 0.51
CCNFP41002 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCNFP41002 INGX-201ENST00000359239 846 ntBASIC18.22■□□□□ 0.51
CCNFP41002 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CCNFP41002 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCNFP41002 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.22■□□□□ 0.51
CCNFP41002 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCNFP41002 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCNFP41002 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.22■□□□□ 0.51
CCNFP41002 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.22■□□□□ 0.51
CCNFP41002 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CCNFP41002 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.22■□□□□ 0.51
CCNFP41002 AC108860.2-201ENST00000562760 2183 ntBASIC18.22■□□□□ 0.51
CCNFP41002 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
CCNFP41002 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
CCNFP41002 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.22■□□□□ 0.51
CCNFP41002 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 AC138932.1-201ENST00000534164 6830 ntBASIC18.22■□□□□ 0.51
CCNFP41002 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.22■□□□□ 0.51
CCNFP41002 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCNFP41002 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNFP41002 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCNFP41002 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
CCNFP41002 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.21■□□□□ 0.51
CCNFP41002 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCNFP41002 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.21■□□□□ 0.51
CCNFP41002 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.21■□□□□ 0.51
CCNFP41002 AC011270.2-201ENST00000624293 2550 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms