Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.95□□□□□ -0.02
SNCAP37840 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.95□□□□□ -0.02
SNCAP37840 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.95□□□□□ -0.02
SNCAP37840 AL023875.1-201ENST00000640777 796 ntBASIC14.95□□□□□ -0.02
SNCAP37840 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SNCAP37840 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SNCAP37840 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.95□□□□□ -0.02
SNCAP37840 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.95□□□□□ -0.02
SNCAP37840 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.95□□□□□ -0.02
SNCAP37840 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SNCAP37840 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.95□□□□□ -0.02
SNCAP37840 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SNCAP37840 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SNCAP37840 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.94□□□□□ -0.02
SNCAP37840 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 AC090192.1-201ENST00000517740 490 ntBASIC14.94□□□□□ -0.02
SNCAP37840 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.94□□□□□ -0.02
SNCAP37840 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SNCAP37840 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.94□□□□□ -0.02
SNCAP37840 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SNCAP37840 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.94□□□□□ -0.02
SNCAP37840 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SNCAP37840 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.94□□□□□ -0.02
SNCAP37840 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNCAP37840 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
SNCAP37840 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SNCAP37840 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.93□□□□□ -0.02
SNCAP37840 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.93□□□□□ -0.02
SNCAP37840 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SNCAP37840 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.93□□□□□ -0.02
SNCAP37840 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
SNCAP37840 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.93□□□□□ -0.02
SNCAP37840 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SNCAP37840 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.93□□□□□ -0.02
SNCAP37840 PRSS44-201ENST00000515154 1146 ntBASIC14.93□□□□□ -0.02
SNCAP37840 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
SNCAP37840 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.93□□□□□ -0.02
SNCAP37840 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.93□□□□□ -0.02
SNCAP37840 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SNCAP37840 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.93□□□□□ -0.02
SNCAP37840 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SNCAP37840 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
SNCAP37840 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SNCAP37840 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SNCAP37840 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.93□□□□□ -0.02
SNCAP37840 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
SNCAP37840 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SNCAP37840 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.92□□□□□ -0.02
SNCAP37840 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SNCAP37840 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SNCAP37840 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms