Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 RASA4DP-201ENST00000460726 1199 ntBASIC19.12■□□□□ 0.65
RFC1P35251 AC034232.1-201ENST00000506026 1064 ntBASIC19.12■□□□□ 0.65
RFC1P35251 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.12■□□□□ 0.65
RFC1P35251 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
RFC1P35251 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.12■□□□□ 0.65
RFC1P35251 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.12■□□□□ 0.65
RFC1P35251 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.12■□□□□ 0.65
RFC1P35251 AC006011.2-201ENST00000621313 1158 ntBASIC19.12■□□□□ 0.65
RFC1P35251 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
RFC1P35251 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 AC068880.1-201ENST00000507289 2297 ntBASIC19.12■□□□□ 0.65
RFC1P35251 AP000997.3-201ENST00000623333 2250 ntBASIC19.12■□□□□ 0.65
RFC1P35251 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RFC1P35251 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.12■□□□□ 0.65
RFC1P35251 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.12■□□□□ 0.65
RFC1P35251 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
RFC1P35251 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFC1P35251 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RFC1P35251 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.12■□□□□ 0.65
RFC1P35251 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.11■□□□□ 0.65
RFC1P35251 AC093010.1-201ENST00000473625 1624 ntBASIC19.11■□□□□ 0.65
RFC1P35251 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.11■□□□□ 0.65
RFC1P35251 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFC1P35251 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.11■□□□□ 0.65
RFC1P35251 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RFC1P35251 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.11■□□□□ 0.65
RFC1P35251 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFC1P35251 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFC1P35251 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFC1P35251 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.11■□□□□ 0.65
RFC1P35251 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.11■□□□□ 0.65
RFC1P35251 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RFC1P35251 AC079602.3-201ENST00000623931 403 ntBASIC19.11■□□□□ 0.65
RFC1P35251 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RFC1P35251 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFC1P35251 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
RFC1P35251 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFC1P35251 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFC1P35251 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RFC1P35251 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFC1P35251 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.11■□□□□ 0.65
RFC1P35251 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.11■□□□□ 0.65
RFC1P35251 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.11■□□□□ 0.65
RFC1P35251 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFC1P35251 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.11■□□□□ 0.65
RFC1P35251 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFC1P35251 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFC1P35251 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.11■□□□□ 0.65
RFC1P35251 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFC1P35251 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RFC1P35251 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RFC1P35251 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.1■□□□□ 0.65
RFC1P35251 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.1■□□□□ 0.65
RFC1P35251 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RFC1P35251 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RFC1P35251 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 SPDYE15P-201ENST00000424157 909 ntBASIC19.1■□□□□ 0.65
RFC1P35251 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.1■□□□□ 0.65
RFC1P35251 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.1■□□□□ 0.65
RFC1P35251 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.1■□□□□ 0.65
RFC1P35251 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.1■□□□□ 0.65
RFC1P35251 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RFC1P35251 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.1■□□□□ 0.65
RFC1P35251 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.1■□□□□ 0.65
RFC1P35251 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 AC008764.6-201ENST00000595909 2069 ntBASIC19.1■□□□□ 0.65
RFC1P35251 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.1■□□□□ 0.65
RFC1P35251 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.1■□□□□ 0.65
RFC1P35251 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RFC1P35251 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFC1P35251 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms