Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC138894.3-201ENST00000603787 634 ntBASIC18.57■□□□□ 0.56
SLC6A4P31645 AL732292.2-201ENST00000609649 430 ntBASIC18.57■□□□□ 0.56
SLC6A4P31645 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC6A4P31645 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC6A4P31645 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A4P31645 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A4P31645 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SLC6A4P31645 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SLC6A4P31645 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SLC6A4P31645 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SLC6A4P31645 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SLC6A4P31645 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.56■□□□□ 0.56
SLC6A4P31645 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A4P31645 UNC93B7-201ENST00000509439 705 ntBASIC18.56■□□□□ 0.56
SLC6A4P31645 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.56■□□□□ 0.56
SLC6A4P31645 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.56■□□□□ 0.56
SLC6A4P31645 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC6A4P31645 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A4P31645 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A4P31645 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SLC6A4P31645 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.56■□□□□ 0.56
SLC6A4P31645 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A4P31645 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A4P31645 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A4P31645 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC6A4P31645 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 AL020996.1-203ENST00000536896 2307 ntBASIC18.55■□□□□ 0.56
SLC6A4P31645 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC6A4P31645 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC6A4P31645 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 TSPY19P-201ENST00000418461 509 ntBASIC18.55■□□□□ 0.56
SLC6A4P31645 TSPY18P-201ENST00000441642 509 ntBASIC18.55■□□□□ 0.56
SLC6A4P31645 AC112698.1-201ENST00000510299 916 ntBASIC18.55■□□□□ 0.56
SLC6A4P31645 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
SLC6A4P31645 AL121894.2-201ENST00000602977 491 ntBASIC18.55■□□□□ 0.56
SLC6A4P31645 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC6A4P31645 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SLC6A4P31645 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC6A4P31645 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SLC6A4P31645 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A4P31645 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC6A4P31645 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SLC6A4P31645 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SLC6A4P31645 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC6A4P31645 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.54■□□□□ 0.56
SLC6A4P31645 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SLC6A4P31645 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms