Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PTPN3P26045 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
PTPN3P26045 RNF152P1-201ENST00000397754 604 ntBASIC18.49■□□□□ 0.55
PTPN3P26045 TSPY5P-201ENST00000426936 936 ntBASIC18.49■□□□□ 0.55
PTPN3P26045 HLA-F-220ENST00000434407 884 ntBASIC18.49■□□□□ 0.55
PTPN3P26045 KRT18P38-201ENST00000449496 1282 ntBASIC18.49■□□□□ 0.55
PTPN3P26045 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN3P26045 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.49■□□□□ 0.55
PTPN3P26045 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
PTPN3P26045 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PTPN3P26045 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PTPN3P26045 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PTPN3P26045 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PTPN3P26045 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.49■□□□□ 0.55
PTPN3P26045 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PTPN3P26045 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PTPN3P26045 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PTPN3P26045 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PTPN3P26045 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PTPN3P26045 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.49■□□□□ 0.55
PTPN3P26045 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PTPN3P26045 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN3P26045 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PTPN3P26045 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PTPN3P26045 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN3P26045 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 AK4P3-201ENST00000418260 669 ntBASIC18.48■□□□□ 0.55
PTPN3P26045 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.48■□□□□ 0.55
PTPN3P26045 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN3P26045 AC092597.1-201ENST00000487352 616 ntBASIC18.48■□□□□ 0.55
PTPN3P26045 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.48■□□□□ 0.55
PTPN3P26045 DUTP2-201ENST00000519164 463 ntBASIC18.48■□□□□ 0.55
PTPN3P26045 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.48■□□□□ 0.55
PTPN3P26045 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.48■□□□□ 0.55
PTPN3P26045 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.48■□□□□ 0.55
PTPN3P26045 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN3P26045 AC024563.2-201ENST00000603282 481 ntBASIC18.48■□□□□ 0.55
PTPN3P26045 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.48■□□□□ 0.55
PTPN3P26045 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
PTPN3P26045 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PTPN3P26045 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PTPN3P26045 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTPN3P26045 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.47■□□□□ 0.55
PTPN3P26045 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.47■□□□□ 0.55
PTPN3P26045 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.47■□□□□ 0.55
PTPN3P26045 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 RCN1P1-201ENST00000400413 996 ntBASIC18.47■□□□□ 0.55
PTPN3P26045 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PTPN3P26045 AC104076.2-201ENST00000448912 469 ntBASIC18.47■□□□□ 0.55
PTPN3P26045 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.47■□□□□ 0.55
PTPN3P26045 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.47■□□□□ 0.55
PTPN3P26045 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PTPN3P26045 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms