Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.45■□□□□ 0.54
NFKB1P19838 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.45■□□□□ 0.54
NFKB1P19838 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.45■□□□□ 0.54
NFKB1P19838 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.45■□□□□ 0.54
NFKB1P19838 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.45■□□□□ 0.54
NFKB1P19838 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NFKB1P19838 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
NFKB1P19838 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.45■□□□□ 0.54
NFKB1P19838 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NFKB1P19838 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKB1P19838 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.45■□□□□ 0.54
NFKB1P19838 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKB1P19838 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKB1P19838 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.44■□□□□ 0.54
NFKB1P19838 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NFKB1P19838 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKB1P19838 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKB1P19838 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKB1P19838 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKB1P19838 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKB1P19838 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.44■□□□□ 0.54
NFKB1P19838 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NFKB1P19838 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKB1P19838 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKB1P19838 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
NFKB1P19838 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
NFKB1P19838 RNF152P1-201ENST00000397754 604 ntBASIC18.44■□□□□ 0.54
NFKB1P19838 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
NFKB1P19838 TSPY5P-201ENST00000426936 936 ntBASIC18.44■□□□□ 0.54
NFKB1P19838 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.44■□□□□ 0.54
NFKB1P19838 AC092597.1-201ENST00000487352 616 ntBASIC18.44■□□□□ 0.54
NFKB1P19838 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.44■□□□□ 0.54
NFKB1P19838 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKB1P19838 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.44■□□□□ 0.54
NFKB1P19838 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
NFKB1P19838 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NFKB1P19838 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
NFKB1P19838 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.44■□□□□ 0.54
NFKB1P19838 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKB1P19838 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.44■□□□□ 0.54
NFKB1P19838 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKB1P19838 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NFKB1P19838 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.43■□□□□ 0.54
NFKB1P19838 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.43■□□□□ 0.54
NFKB1P19838 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NFKB1P19838 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NFKB1P19838 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.43■□□□□ 0.54
NFKB1P19838 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NFKB1P19838 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NFKB1P19838 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NFKB1P19838 LINC00167-201ENST00000530583 1419 ntBASIC18.43■□□□□ 0.54
NFKB1P19838 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NFKB1P19838 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NFKB1P19838 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NFKB1P19838 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NFKB1P19838 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NFKB1P19838 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.43■□□□□ 0.54
NFKB1P19838 RCN1P1-201ENST00000400413 996 ntBASIC18.43■□□□□ 0.54
NFKB1P19838 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NFKB1P19838 AC104076.2-201ENST00000448912 469 ntBASIC18.43■□□□□ 0.54
NFKB1P19838 AL359075.1-203ENST00000462729 1002 ntBASIC18.43■□□□□ 0.54
NFKB1P19838 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.43■□□□□ 0.54
NFKB1P19838 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.43■□□□□ 0.54
NFKB1P19838 RN7SL850P-201ENST00000579959 291 ntBASIC18.43■□□□□ 0.54
NFKB1P19838 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
NFKB1P19838 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NFKB1P19838 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NFKB1P19838 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NFKB1P19838 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
NFKB1P19838 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
NFKB1P19838 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NFKB1P19838 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NFKB1P19838 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
NFKB1P19838 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.43■□□□□ 0.54
NFKB1P19838 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
NFKB1P19838 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NFKB1P19838 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.42■□□□□ 0.54
NFKB1P19838 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.42■□□□□ 0.54
NFKB1P19838 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 HTR7P1-202ENST00000624664 4411 ntBASIC18.42■□□□□ 0.54
NFKB1P19838 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.42■□□□□ 0.54
NFKB1P19838 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.42■□□□□ 0.54
NFKB1P19838 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NFKB1P19838 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.42■□□□□ 0.54
NFKB1P19838 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.42■□□□□ 0.54
NFKB1P19838 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.42■□□□□ 0.54
NFKB1P19838 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms