Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
XRCC1P18887 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
XRCC1P18887 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.09■□□□□ 0.49
XRCC1P18887 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
XRCC1P18887 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
XRCC1P18887 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 AC005332.1-201ENST00000577698 1310 ntBASIC18.09■□□□□ 0.49
XRCC1P18887 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.09■□□□□ 0.49
XRCC1P18887 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.09■□□□□ 0.49
XRCC1P18887 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
XRCC1P18887 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.09■□□□□ 0.49
XRCC1P18887 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.09■□□□□ 0.49
XRCC1P18887 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.09■□□□□ 0.49
XRCC1P18887 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
XRCC1P18887 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
XRCC1P18887 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.09■□□□□ 0.49
XRCC1P18887 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.09■□□□□ 0.49
XRCC1P18887 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.09■□□□□ 0.49
XRCC1P18887 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.09■□□□□ 0.49
XRCC1P18887 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC1P18887 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.08■□□□□ 0.49
XRCC1P18887 AL162741.1-201ENST00000565563 1558 ntBASIC18.08■□□□□ 0.49
XRCC1P18887 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
XRCC1P18887 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
XRCC1P18887 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
XRCC1P18887 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.08■□□□□ 0.49
XRCC1P18887 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
XRCC1P18887 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
XRCC1P18887 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
XRCC1P18887 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
XRCC1P18887 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
XRCC1P18887 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
XRCC1P18887 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
XRCC1P18887 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.08■□□□□ 0.48
XRCC1P18887 AL357033.4-201ENST00000617703 1807 ntBASIC18.08■□□□□ 0.48
XRCC1P18887 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.08■□□□□ 0.48
XRCC1P18887 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
XRCC1P18887 AC092597.1-201ENST00000487352 616 ntBASIC18.08■□□□□ 0.48
XRCC1P18887 MIR3180-4-201ENST00000582223 153 ntBASIC18.08■□□□□ 0.48
XRCC1P18887 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
XRCC1P18887 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.08■□□□□ 0.48
XRCC1P18887 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
XRCC1P18887 AC116407.4-201ENST00000623319 1061 ntBASIC18.08■□□□□ 0.48
XRCC1P18887 AL157888.1-201ENST00000631930 593 ntBASIC18.08■□□□□ 0.48
XRCC1P18887 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
XRCC1P18887 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
XRCC1P18887 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
XRCC1P18887 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.08■□□□□ 0.48
XRCC1P18887 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
XRCC1P18887 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
XRCC1P18887 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC1P18887 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC1P18887 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC1P18887 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC1P18887 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
XRCC1P18887 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC1P18887 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC1P18887 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.07■□□□□ 0.48
XRCC1P18887 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC1P18887 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
XRCC1P18887 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC1P18887 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC1P18887 VENTXP5-201ENST00000523979 775 ntBASIC18.07■□□□□ 0.48
XRCC1P18887 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.07■□□□□ 0.48
XRCC1P18887 AC010240.3-201ENST00000607688 395 ntBASIC18.07■□□□□ 0.48
XRCC1P18887 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.07■□□□□ 0.48
XRCC1P18887 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC1P18887 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.07■□□□□ 0.48
XRCC1P18887 MTMR9LP-203ENST00000426597 1545 ntBASIC18.07■□□□□ 0.48
XRCC1P18887 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC1P18887 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC1P18887 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
XRCC1P18887 IER3-202ENST00000376377 1350 ntBASIC18.06■□□□□ 0.48
XRCC1P18887 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
XRCC1P18887 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
XRCC1P18887 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.06■□□□□ 0.48
XRCC1P18887 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
XRCC1P18887 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
XRCC1P18887 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
XRCC1P18887 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
XRCC1P18887 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.06■□□□□ 0.48
XRCC1P18887 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.06■□□□□ 0.48
XRCC1P18887 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.06■□□□□ 0.48
XRCC1P18887 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.06■□□□□ 0.48
XRCC1P18887 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.06■□□□□ 0.48
XRCC1P18887 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.06■□□□□ 0.48
XRCC1P18887 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
XRCC1P18887 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms