Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.12■□□□□ 0.65
KRT3P12035 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.12■□□□□ 0.65
KRT3P12035 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT3P12035 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.12■□□□□ 0.65
KRT3P12035 AC008687.5-201ENST00000593746 558 ntBASIC19.12■□□□□ 0.65
KRT3P12035 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
KRT3P12035 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT3P12035 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT3P12035 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT3P12035 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT3P12035 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
KRT3P12035 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT3P12035 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT3P12035 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT3P12035 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.12■□□□□ 0.65
KRT3P12035 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT3P12035 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT3P12035 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KRT3P12035 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT3P12035 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT3P12035 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT3P12035 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT3P12035 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT3P12035 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT3P12035 AP000997.3-201ENST00000623333 2250 ntBASIC19.11■□□□□ 0.65
KRT3P12035 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT3P12035 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT3P12035 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT3P12035 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
KRT3P12035 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.11■□□□□ 0.65
KRT3P12035 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT3P12035 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT3P12035 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
KRT3P12035 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.11■□□□□ 0.65
KRT3P12035 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT3P12035 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT3P12035 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
KRT3P12035 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KRT3P12035 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT3P12035 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT3P12035 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
KRT3P12035 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
KRT3P12035 RNF152P1-201ENST00000397754 604 ntBASIC19.1■□□□□ 0.65
KRT3P12035 STARP1-201ENST00000397973 869 ntBASIC19.1■□□□□ 0.65
KRT3P12035 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 TSPY5P-201ENST00000426936 936 ntBASIC19.1■□□□□ 0.65
KRT3P12035 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT3P12035 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT3P12035 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.1■□□□□ 0.65
KRT3P12035 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.1■□□□□ 0.65
KRT3P12035 AC006011.2-201ENST00000621313 1158 ntBASIC19.1■□□□□ 0.65
KRT3P12035 AC079602.3-201ENST00000623931 403 ntBASIC19.1■□□□□ 0.65
KRT3P12035 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT3P12035 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT3P12035 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KRT3P12035 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT3P12035 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KRT3P12035 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT3P12035 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT3P12035 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
KRT3P12035 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.09■□□□□ 0.65
KRT3P12035 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
KRT3P12035 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT3P12035 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
KRT3P12035 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 AC008764.6-201ENST00000595909 2069 ntBASIC19.09■□□□□ 0.65
KRT3P12035 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
KRT3P12035 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.09■□□□□ 0.65
KRT3P12035 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
KRT3P12035 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 SPDYE15P-201ENST00000424157 909 ntBASIC19.09■□□□□ 0.65
KRT3P12035 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT3P12035 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms