Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RARBP10826 AC008735.5-201ENST00000623544 497 ntBASIC20.25■□□□□ 0.83
RARBP10826 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RARBP10826 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
RARBP10826 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARBP10826 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.25■□□□□ 0.83
RARBP10826 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.24■□□□□ 0.83
RARBP10826 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.24■□□□□ 0.83
RARBP10826 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.24■□□□□ 0.83
RARBP10826 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RARBP10826 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.24■□□□□ 0.83
RARBP10826 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.24■□□□□ 0.83
RARBP10826 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.24■□□□□ 0.83
RARBP10826 AC010327.4-202ENST00000591484 748 ntBASIC20.24■□□□□ 0.83
RARBP10826 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
RARBP10826 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARBP10826 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.24■□□□□ 0.83
RARBP10826 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.23■□□□□ 0.83
RARBP10826 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
RARBP10826 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RARBP10826 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.23■□□□□ 0.83
RARBP10826 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
RARBP10826 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RARBP10826 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARBP10826 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.23■□□□□ 0.83
RARBP10826 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARBP10826 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARBP10826 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.23■□□□□ 0.83
RARBP10826 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.23■□□□□ 0.83
RARBP10826 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.23■□□□□ 0.83
RARBP10826 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RARBP10826 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARBP10826 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RARBP10826 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.23■□□□□ 0.83
RARBP10826 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARBP10826 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.23■□□□□ 0.83
RARBP10826 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RARBP10826 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARBP10826 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARBP10826 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RARBP10826 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.23■□□□□ 0.83
RARBP10826 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARBP10826 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RARBP10826 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RARBP10826 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RARBP10826 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RARBP10826 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RARBP10826 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RARBP10826 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RARBP10826 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RARBP10826 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.22■□□□□ 0.83
RARBP10826 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.22■□□□□ 0.83
RARBP10826 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.22■□□□□ 0.83
RARBP10826 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.22■□□□□ 0.83
RARBP10826 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.22■□□□□ 0.83
RARBP10826 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.22■□□□□ 0.83
RARBP10826 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.22■□□□□ 0.83
RARBP10826 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.22■□□□□ 0.83
RARBP10826 AC105339.3-201ENST00000560043 636 ntBASIC20.22■□□□□ 0.83
RARBP10826 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.22■□□□□ 0.83
RARBP10826 MIR3687-2-201ENST00000577708 61 ntBASIC20.22■□□□□ 0.83
RARBP10826 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RARBP10826 MIR3687-1-201ENST00000614492 61 ntBASIC20.22■□□□□ 0.83
RARBP10826 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.22■□□□□ 0.83
RARBP10826 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.22■□□□□ 0.83
RARBP10826 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
RARBP10826 AL161938.1-201ENST00000569833 2180 ntBASIC20.22■□□□□ 0.83
RARBP10826 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.22■□□□□ 0.83
RARBP10826 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.22■□□□□ 0.83
RARBP10826 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RARBP10826 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.21■□□□□ 0.83
RARBP10826 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RARBP10826 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RARBP10826 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RARBP10826 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RARBP10826 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.21■□□□□ 0.83
RARBP10826 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RARBP10826 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.21■□□□□ 0.83
RARBP10826 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms