Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 KRT18P13-201ENST00000400056 1290 ntBASIC19.99■□□□□ 0.79
MMP3P08254 IGHV3-22-201ENST00000520721 359 ntBASIC19.99■□□□□ 0.79
MMP3P08254 OR7E14P-202ENST00000530490 1290 ntBASIC19.99■□□□□ 0.79
MMP3P08254 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.99■□□□□ 0.79
MMP3P08254 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.99■□□□□ 0.79
MMP3P08254 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.99■□□□□ 0.79
MMP3P08254 AP000867.4-201ENST00000641616 219 ntBASIC19.99■□□□□ 0.79
MMP3P08254 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MMP3P08254 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
MMP3P08254 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP3P08254 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP3P08254 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MMP3P08254 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MMP3P08254 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.99■□□□□ 0.79
MMP3P08254 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.99■□□□□ 0.79
MMP3P08254 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP3P08254 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MMP3P08254 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
MMP3P08254 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP3P08254 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.98■□□□□ 0.79
MMP3P08254 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MMP3P08254 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP3P08254 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.98■□□□□ 0.79
MMP3P08254 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MMP3P08254 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
MMP3P08254 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP3P08254 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.98■□□□□ 0.79
MMP3P08254 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.98■□□□□ 0.79
MMP3P08254 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
MMP3P08254 AC012640.2-201ENST00000561606 901 ntBASIC19.98■□□□□ 0.79
MMP3P08254 NKAPP1-205ENST00000585790 367 ntBASIC19.98■□□□□ 0.79
MMP3P08254 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.98■□□□□ 0.79
MMP3P08254 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MMP3P08254 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.98■□□□□ 0.79
MMP3P08254 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
MMP3P08254 HLA-J-201ENST00000462773 1622 ntBASIC19.98■□□□□ 0.79
MMP3P08254 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.97■□□□□ 0.79
MMP3P08254 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.97■□□□□ 0.79
MMP3P08254 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
MMP3P08254 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP3P08254 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP3P08254 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP3P08254 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP3P08254 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.97■□□□□ 0.79
MMP3P08254 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP3P08254 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
MMP3P08254 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP3P08254 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP3P08254 MIR940-201ENST00000401276 94 ntBASIC19.97■□□□□ 0.79
MMP3P08254 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.97■□□□□ 0.79
MMP3P08254 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP3P08254 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.97■□□□□ 0.79
MMP3P08254 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.97■□□□□ 0.79
MMP3P08254 AC139530.3-201ENST00000620344 690 ntBASIC19.97■□□□□ 0.79
MMP3P08254 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.97■□□□□ 0.79
MMP3P08254 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP3P08254 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP3P08254 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MMP3P08254 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MMP3P08254 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
MMP3P08254 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
MMP3P08254 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 AC093010.1-201ENST00000473625 1624 ntBASIC19.96■□□□□ 0.79
MMP3P08254 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
MMP3P08254 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 AC096633.1-201ENST00000422446 749 ntBASIC19.96■□□□□ 0.79
MMP3P08254 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.96■□□□□ 0.79
MMP3P08254 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.96■□□□□ 0.79
MMP3P08254 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.96■□□□□ 0.79
MMP3P08254 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.96■□□□□ 0.79
MMP3P08254 AC145285.3-201ENST00000564603 959 ntBASIC19.96■□□□□ 0.79
MMP3P08254 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.96■□□□□ 0.79
MMP3P08254 TERC-201ENST00000602385 541 ntBASIC19.96■□□□□ 0.79
MMP3P08254 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 PMS2P7-201ENST00000506558 1336 ntBASIC19.96■□□□□ 0.79
MMP3P08254 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
MMP3P08254 PHGDH-209ENST00000641074 1780 ntBASIC19.95■□□□□ 0.78
MMP3P08254 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP3P08254 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
MMP3P08254 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.95■□□□□ 0.78
MMP3P08254 AC104109.2-201ENST00000602919 1418 ntBASIC19.95■□□□□ 0.78
MMP3P08254 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MMP3P08254 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MMP3P08254 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MMP3P08254 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.95■□□□□ 0.78
MMP3P08254 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.95■□□□□ 0.78
MMP3P08254 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.95■□□□□ 0.78
MMP3P08254 AC098831.1-202ENST00000438821 336 ntBASIC19.95■□□□□ 0.78
MMP3P08254 AC092910.1-201ENST00000482027 1129 ntBASIC19.95■□□□□ 0.78
MMP3P08254 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms