Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.81■□□□□ 0.76
COL1A2P08123 AP001005.1-201ENST00000571755 1248 ntBASIC19.81■□□□□ 0.76
COL1A2P08123 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.81■□□□□ 0.76
COL1A2P08123 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.81■□□□□ 0.76
COL1A2P08123 WIZP1-201ENST00000531444 2299 ntBASIC19.81■□□□□ 0.76
COL1A2P08123 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A2P08123 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.8■□□□□ 0.76
COL1A2P08123 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A2P08123 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
COL1A2P08123 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COL1A2P08123 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A2P08123 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.8■□□□□ 0.76
COL1A2P08123 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
COL1A2P08123 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A2P08123 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COL1A2P08123 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A2P08123 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.8■□□□□ 0.76
COL1A2P08123 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A2P08123 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A2P08123 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.8■□□□□ 0.76
COL1A2P08123 AC018712.1-201ENST00000455767 687 ntBASIC19.8■□□□□ 0.76
COL1A2P08123 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.8■□□□□ 0.76
COL1A2P08123 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.8■□□□□ 0.76
COL1A2P08123 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.8■□□□□ 0.76
COL1A2P08123 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.8■□□□□ 0.76
COL1A2P08123 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
COL1A2P08123 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A2P08123 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.8■□□□□ 0.76
COL1A2P08123 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COL1A2P08123 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A2P08123 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A2P08123 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.79■□□□□ 0.76
COL1A2P08123 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A2P08123 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A2P08123 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A2P08123 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.79■□□□□ 0.76
COL1A2P08123 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A2P08123 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.79■□□□□ 0.76
COL1A2P08123 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.79■□□□□ 0.76
COL1A2P08123 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.79■□□□□ 0.76
COL1A2P08123 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.79■□□□□ 0.76
COL1A2P08123 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.79■□□□□ 0.76
COL1A2P08123 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.79■□□□□ 0.76
COL1A2P08123 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
COL1A2P08123 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
COL1A2P08123 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL1A2P08123 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A2P08123 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A2P08123 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A2P08123 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A2P08123 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.79■□□□□ 0.76
COL1A2P08123 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A2P08123 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A2P08123 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A2P08123 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A2P08123 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A2P08123 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL1A2P08123 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A2P08123 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A2P08123 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
COL1A2P08123 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
COL1A2P08123 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.78■□□□□ 0.76
COL1A2P08123 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
COL1A2P08123 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A2P08123 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COL1A2P08123 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A2P08123 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A2P08123 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A2P08123 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A2P08123 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A2P08123 AC122714.2-201ENST00000502787 707 ntBASIC19.78■□□□□ 0.76
COL1A2P08123 AC073648.2-201ENST00000510116 352 ntBASIC19.78■□□□□ 0.76
COL1A2P08123 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.78■□□□□ 0.76
COL1A2P08123 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A2P08123 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
COL1A2P08123 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
COL1A2P08123 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.78■□□□□ 0.76
COL1A2P08123 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
COL1A2P08123 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A2P08123 AC093677.2-201ENST00000600169 1863 ntBASIC19.77■□□□□ 0.76
COL1A2P08123 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A2P08123 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
COL1A2P08123 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.77■□□□□ 0.76
COL1A2P08123 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.77■□□□□ 0.76
COL1A2P08123 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.77■□□□□ 0.76
COL1A2P08123 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.77■□□□□ 0.76
COL1A2P08123 AL031284.1-201ENST00000419297 478 ntBASIC19.77■□□□□ 0.76
COL1A2P08123 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.77■□□□□ 0.76
COL1A2P08123 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.77■□□□□ 0.76
COL1A2P08123 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.77■□□□□ 0.76
COL1A2P08123 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A2P08123 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.77■□□□□ 0.76
COL1A2P08123 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.77■□□□□ 0.76
COL1A2P08123 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.77■□□□□ 0.76
COL1A2P08123 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.77■□□□□ 0.76
COL1A2P08123 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.77■□□□□ 0.76
COL1A2P08123 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A2P08123 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A2P08123 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
COL1A2P08123 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms