Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.25■□□□□ 0.03
CD74P04233 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.25■□□□□ 0.03
CD74P04233 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CD74P04233 AL023284.2-201ENST00000405850 579 ntBASIC15.25■□□□□ 0.03
CD74P04233 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CD74P04233 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CD74P04233 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.25■□□□□ 0.03
CD74P04233 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.25■□□□□ 0.03
CD74P04233 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CD74P04233 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.25■□□□□ 0.03
CD74P04233 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 MTDHP1-201ENST00000605323 784 ntBASIC15.25■□□□□ 0.03
CD74P04233 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.25■□□□□ 0.03
CD74P04233 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CD74P04233 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.25■□□□□ 0.03
CD74P04233 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.25■□□□□ 0.03
CD74P04233 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.25■□□□□ 0.03
CD74P04233 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.25■□□□□ 0.03
CD74P04233 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
CD74P04233 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CD74P04233 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD74P04233 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CD74P04233 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.24■□□□□ 0.03
CD74P04233 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.24■□□□□ 0.03
CD74P04233 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CD74P04233 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CD74P04233 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.24■□□□□ 0.03
CD74P04233 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 MCCD1P1-208ENST00000445732 328 ntBASIC15.24■□□□□ 0.03
CD74P04233 DUTP2-201ENST00000519164 463 ntBASIC15.24■□□□□ 0.03
CD74P04233 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CD74P04233 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.24■□□□□ 0.03
CD74P04233 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
CD74P04233 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
CD74P04233 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD74P04233 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CD74P04233 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CD74P04233 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD74P04233 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CD74P04233 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CD74P04233 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD74P04233 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD74P04233 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD74P04233 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD74P04233 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CD74P04233 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CD74P04233 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.23■□□□□ 0.03
CD74P04233 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CD74P04233 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD74P04233 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD74P04233 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CD74P04233 NIFKP9-201ENST00000419265 221 ntBASIC15.23■□□□□ 0.03
CD74P04233 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.23■□□□□ 0.03
CD74P04233 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD74P04233 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.23■□□□□ 0.03
CD74P04233 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms