Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CLDN1O95832 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
CLDN1O95832 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.18■□□□□ 0.18
CLDN1O95832 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN1O95832 AC034105.1-201ENST00000563488 319 ntBASIC16.18■□□□□ 0.18
CLDN1O95832 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
CLDN1O95832 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN1O95832 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN1O95832 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN1O95832 AC024563.2-201ENST00000603282 481 ntBASIC16.18■□□□□ 0.18
CLDN1O95832 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN1O95832 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN1O95832 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN1O95832 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN1O95832 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN1O95832 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN1O95832 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN1O95832 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN1O95832 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN1O95832 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN1O95832 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.17■□□□□ 0.18
CLDN1O95832 AC004408.2-201ENST00000623613 2777 ntBASIC16.17■□□□□ 0.18
CLDN1O95832 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.17■□□□□ 0.18
CLDN1O95832 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN1O95832 ZNF815P-204ENST00000434898 1737 ntBASIC16.17■□□□□ 0.18
CLDN1O95832 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN1O95832 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN1O95832 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN1O95832 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CLDN1O95832 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN1O95832 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN1O95832 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.17■□□□□ 0.18
CLDN1O95832 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN1O95832 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN1O95832 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.17■□□□□ 0.18
CLDN1O95832 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.17■□□□□ 0.18
CLDN1O95832 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN1O95832 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN1O95832 AL591424.1-201ENST00000442569 1213 ntBASIC16.17■□□□□ 0.18
CLDN1O95832 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.17■□□□□ 0.18
CLDN1O95832 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN1O95832 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN1O95832 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN1O95832 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN1O95832 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN1O95832 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN1O95832 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CLDN1O95832 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN1O95832 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 SDHAP1-207ENST00000440850 2000 ntBASIC16.16■□□□□ 0.18
CLDN1O95832 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLDN1O95832 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.16■□□□□ 0.18
CLDN1O95832 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CLDN1O95832 DNAJB3-201ENST00000446806 729 ntBASIC16.16■□□□□ 0.18
CLDN1O95832 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
CLDN1O95832 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN1O95832 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CLDN1O95832 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLDN1O95832 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN1O95832 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CLDN1O95832 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLDN1O95832 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN1O95832 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN1O95832 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 AC008556.1-201ENST00000610908 2040 ntBASIC16.16■□□□□ 0.18
CLDN1O95832 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CLDN1O95832 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN1O95832 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN1O95832 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLDN1O95832 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms