Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.06■□□□□ 0.16
ALX3O95076 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.06■□□□□ 0.16
ALX3O95076 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.06■□□□□ 0.16
ALX3O95076 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.06■□□□□ 0.16
ALX3O95076 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.06■□□□□ 0.16
ALX3O95076 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.06■□□□□ 0.16
ALX3O95076 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ALX3O95076 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ALX3O95076 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ALX3O95076 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ALX3O95076 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.06■□□□□ 0.16
ALX3O95076 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALX3O95076 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.05■□□□□ 0.16
ALX3O95076 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ALX3O95076 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.05■□□□□ 0.16
ALX3O95076 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.05■□□□□ 0.16
ALX3O95076 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ALX3O95076 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ALX3O95076 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ALX3O95076 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ALX3O95076 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
ALX3O95076 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.05■□□□□ 0.16
ALX3O95076 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ALX3O95076 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.05■□□□□ 0.16
ALX3O95076 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.05■□□□□ 0.16
ALX3O95076 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 AL109659.2-201ENST00000606809 1674 ntBASIC16.05■□□□□ 0.16
ALX3O95076 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ALX3O95076 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALX3O95076 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
ALX3O95076 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.04■□□□□ 0.16
ALX3O95076 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.04■□□□□ 0.16
ALX3O95076 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
ALX3O95076 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ALX3O95076 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ALX3O95076 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ALX3O95076 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.04■□□□□ 0.16
ALX3O95076 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 SLC25A6P5-201ENST00000435663 894 ntBASIC16.04■□□□□ 0.16
ALX3O95076 GCSHP5-201ENST00000443090 522 ntBASIC16.04■□□□□ 0.16
ALX3O95076 AC098590.1-201ENST00000468126 897 ntBASIC16.04■□□□□ 0.16
ALX3O95076 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.04■□□□□ 0.16
ALX3O95076 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.04■□□□□ 0.16
ALX3O95076 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 RARRES2P10-201ENST00000564312 460 ntBASIC16.04■□□□□ 0.16
ALX3O95076 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.04■□□□□ 0.16
ALX3O95076 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 AC073648.6-201ENST00000641589 218 ntBASIC16.04■□□□□ 0.16
ALX3O95076 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ALX3O95076 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 PCDHA1-201ENST00000378133 2726 ntBASIC16.04■□□□□ 0.16
ALX3O95076 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.04■□□□□ 0.16
ALX3O95076 AL499627.1-201ENST00000569373 2188 ntBASIC16.04■□□□□ 0.16
ALX3O95076 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ALX3O95076 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALX3O95076 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms