Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC4O75487 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.19■□□□□ 0.5
GPC4O75487 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GPC4O75487 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.19■□□□□ 0.5
GPC4O75487 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.19■□□□□ 0.5
GPC4O75487 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC4O75487 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC4O75487 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC4O75487 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.19■□□□□ 0.5
GPC4O75487 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.19■□□□□ 0.5
GPC4O75487 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.19■□□□□ 0.5
GPC4O75487 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
GPC4O75487 AC112497.1-201ENST00000624824 639 ntBASIC18.19■□□□□ 0.5
GPC4O75487 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
GPC4O75487 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.19■□□□□ 0.5
GPC4O75487 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC4O75487 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
GPC4O75487 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.19■□□□□ 0.5
GPC4O75487 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
GPC4O75487 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC4O75487 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC4O75487 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GPC4O75487 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC4O75487 CROCCP1-201ENST00000426910 5675 ntBASIC18.18■□□□□ 0.5
GPC4O75487 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC4O75487 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC4O75487 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
GPC4O75487 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.18■□□□□ 0.5
GPC4O75487 AC005521.1-201ENST00000393351 872 ntBASIC18.18■□□□□ 0.5
GPC4O75487 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GPC4O75487 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 AL137013.1-201ENST00000432946 1228 ntBASIC18.18■□□□□ 0.5
GPC4O75487 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC4O75487 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC4O75487 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.18■□□□□ 0.5
GPC4O75487 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.18■□□□□ 0.5
GPC4O75487 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC4O75487 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.18■□□□□ 0.5
GPC4O75487 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.18■□□□□ 0.5
GPC4O75487 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
GPC4O75487 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.18■□□□□ 0.5
GPC4O75487 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GPC4O75487 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GPC4O75487 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GPC4O75487 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
GPC4O75487 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC4O75487 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC4O75487 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
GPC4O75487 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC4O75487 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 LIN28AP1-201ENST00000429574 405 ntBASIC18.17■□□□□ 0.5
GPC4O75487 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.17■□□□□ 0.5
GPC4O75487 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC4O75487 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GPC4O75487 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
GPC4O75487 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.17■□□□□ 0.5
GPC4O75487 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
GPC4O75487 AC104390.1-201ENST00000555663 520 ntBASIC18.17■□□□□ 0.5
GPC4O75487 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.17■□□□□ 0.5
GPC4O75487 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC4O75487 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
GPC4O75487 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
GPC4O75487 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.17■□□□□ 0.5
GPC4O75487 AP000997.3-201ENST00000623333 2250 ntBASIC18.17■□□□□ 0.5
GPC4O75487 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GPC4O75487 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms