Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.88■□□□□ 0.61
LRCH4O75427 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.88■□□□□ 0.61
LRCH4O75427 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRCH4O75427 AC012317.2-201ENST00000623305 2251 ntBASIC18.88■□□□□ 0.61
LRCH4O75427 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LRCH4O75427 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.87■□□□□ 0.61
LRCH4O75427 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.87■□□□□ 0.61
LRCH4O75427 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
LRCH4O75427 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
LRCH4O75427 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LRCH4O75427 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.87■□□□□ 0.61
LRCH4O75427 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LRCH4O75427 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 RNF152P1-201ENST00000397754 604 ntBASIC18.87■□□□□ 0.61
LRCH4O75427 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.87■□□□□ 0.61
LRCH4O75427 TSPY5P-201ENST00000426936 936 ntBASIC18.87■□□□□ 0.61
LRCH4O75427 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.87■□□□□ 0.61
LRCH4O75427 AC092597.1-201ENST00000487352 616 ntBASIC18.87■□□□□ 0.61
LRCH4O75427 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LRCH4O75427 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.87■□□□□ 0.61
LRCH4O75427 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
LRCH4O75427 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
LRCH4O75427 KRT89P-201ENST00000620027 1478 ntBASIC18.87■□□□□ 0.61
LRCH4O75427 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.87■□□□□ 0.61
LRCH4O75427 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LRCH4O75427 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRCH4O75427 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.86■□□□□ 0.61
LRCH4O75427 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.86■□□□□ 0.61
LRCH4O75427 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LRCH4O75427 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.86■□□□□ 0.61
LRCH4O75427 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LRCH4O75427 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.86■□□□□ 0.61
LRCH4O75427 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.86■□□□□ 0.61
LRCH4O75427 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.86■□□□□ 0.61
LRCH4O75427 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.86■□□□□ 0.61
LRCH4O75427 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.86■□□□□ 0.61
LRCH4O75427 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.86■□□□□ 0.61
LRCH4O75427 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LRCH4O75427 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LRCH4O75427 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.86■□□□□ 0.61
LRCH4O75427 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LRCH4O75427 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LRCH4O75427 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LRCH4O75427 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 AC100803.2-201ENST00000562459 1963 ntBASIC18.86■□□□□ 0.61
LRCH4O75427 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LRCH4O75427 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCH4O75427 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
LRCH4O75427 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LRCH4O75427 AC006116.8-202ENST00000587620 1550 ntBASIC18.85■□□□□ 0.61
LRCH4O75427 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH4O75427 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH4O75427 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
LRCH4O75427 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.85■□□□□ 0.61
LRCH4O75427 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH4O75427 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH4O75427 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LRCH4O75427 AK4P3-201ENST00000418260 669 ntBASIC18.85■□□□□ 0.61
LRCH4O75427 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.85■□□□□ 0.61
LRCH4O75427 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH4O75427 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.85■□□□□ 0.61
LRCH4O75427 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LRCH4O75427 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LRCH4O75427 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH4O75427 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
LRCH4O75427 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
LRCH4O75427 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH4O75427 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRCH4O75427 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH4O75427 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH4O75427 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms