Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.86■□□□□ 0.93
PRPF3O43395 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
PRPF3O43395 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PRPF3O43395 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF3O43395 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.86■□□□□ 0.93
PRPF3O43395 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRPF3O43395 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF3O43395 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PRPF3O43395 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF3O43395 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF3O43395 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF3O43395 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PRPF3O43395 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF3O43395 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.85■□□□□ 0.93
PRPF3O43395 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF3O43395 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PRPF3O43395 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.85■□□□□ 0.93
PRPF3O43395 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.85■□□□□ 0.93
PRPF3O43395 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.85■□□□□ 0.93
PRPF3O43395 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.85■□□□□ 0.93
PRPF3O43395 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.85■□□□□ 0.93
PRPF3O43395 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF3O43395 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PRPF3O43395 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF3O43395 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF3O43395 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.85■□□□□ 0.93
PRPF3O43395 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF3O43395 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF3O43395 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.85■□□□□ 0.93
PRPF3O43395 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRPF3O43395 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PRPF3O43395 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPF3O43395 KRT18P55-202ENST00000578578 1546 ntBASIC20.84■□□□□ 0.93
PRPF3O43395 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPF3O43395 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.84■□□□□ 0.93
PRPF3O43395 AC022898.2-201ENST00000616822 1312 ntBASIC20.84■□□□□ 0.93
PRPF3O43395 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPF3O43395 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PRPF3O43395 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.84■□□□□ 0.93
PRPF3O43395 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PRPF3O43395 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.84■□□□□ 0.93
PRPF3O43395 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.84■□□□□ 0.93
PRPF3O43395 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.84■□□□□ 0.93
PRPF3O43395 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPF3O43395 AC068472.1-201ENST00000474589 881 ntBASIC20.84■□□□□ 0.93
PRPF3O43395 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.84■□□□□ 0.93
PRPF3O43395 KRT8P26-201ENST00000534154 1276 ntBASIC20.84■□□□□ 0.93
PRPF3O43395 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.84■□□□□ 0.93
PRPF3O43395 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PRPF3O43395 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPF3O43395 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PRPF3O43395 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPF3O43395 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PRPF3O43395 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.84■□□□□ 0.93
PRPF3O43395 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.84■□□□□ 0.93
PRPF3O43395 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRPF3O43395 AC008764.6-201ENST00000595909 2069 ntBASIC20.84■□□□□ 0.93
PRPF3O43395 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.84■□□□□ 0.93
PRPF3O43395 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF3O43395 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.83■□□□□ 0.93
PRPF3O43395 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF3O43395 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.83■□□□□ 0.93
PRPF3O43395 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PRPF3O43395 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PRPF3O43395 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF3O43395 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF3O43395 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRPF3O43395 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PRPF3O43395 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.83■□□□□ 0.93
PRPF3O43395 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.83■□□□□ 0.93
PRPF3O43395 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PRPF3O43395 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PRPF3O43395 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.83■□□□□ 0.92
PRPF3O43395 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PRPF3O43395 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRPF3O43395 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRPF3O43395 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRPF3O43395 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PRPF3O43395 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF3O43395 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF3O43395 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF3O43395 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF3O43395 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.82■□□□□ 0.92
PRPF3O43395 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF3O43395 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.82■□□□□ 0.92
PRPF3O43395 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRPF3O43395 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms