Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.36■□□□□ 0.69
SPTLC1O15269 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC1O15269 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SPTLC1O15269 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC1O15269 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC1O15269 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
SPTLC1O15269 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC1O15269 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC1O15269 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.36■□□□□ 0.69
SPTLC1O15269 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC1O15269 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.36■□□□□ 0.69
SPTLC1O15269 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC1O15269 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC1O15269 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPTLC1O15269 NSUN5P1-202ENST00000421140 1535 ntBASIC19.35■□□□□ 0.69
SPTLC1O15269 NSUN5P2-203ENST00000457352 1529 ntBASIC19.35■□□□□ 0.69
SPTLC1O15269 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.35■□□□□ 0.69
SPTLC1O15269 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SPTLC1O15269 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SPTLC1O15269 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SPTLC1O15269 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.35■□□□□ 0.69
SPTLC1O15269 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.35■□□□□ 0.69
SPTLC1O15269 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.35■□□□□ 0.69
SPTLC1O15269 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 Z69720.1-201ENST00000601483 472 ntBASIC19.35■□□□□ 0.69
SPTLC1O15269 AL732292.2-201ENST00000609649 430 ntBASIC19.35■□□□□ 0.69
SPTLC1O15269 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.35■□□□□ 0.69
SPTLC1O15269 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.35■□□□□ 0.69
SPTLC1O15269 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.35■□□□□ 0.69
SPTLC1O15269 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 AC026471.1-201ENST00000564629 3026 ntBASIC19.35■□□□□ 0.69
SPTLC1O15269 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.35■□□□□ 0.69
SPTLC1O15269 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPTLC1O15269 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SPTLC1O15269 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 AC138932.1-201ENST00000534164 6830 ntBASIC19.34■□□□□ 0.69
SPTLC1O15269 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SPTLC1O15269 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.34■□□□□ 0.69
SPTLC1O15269 TSPY19P-201ENST00000418461 509 ntBASIC19.34■□□□□ 0.69
SPTLC1O15269 TSPY18P-201ENST00000441642 509 ntBASIC19.34■□□□□ 0.69
SPTLC1O15269 MTCL1P1-201ENST00000446207 792 ntBASIC19.34■□□□□ 0.69
SPTLC1O15269 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.34■□□□□ 0.69
SPTLC1O15269 AC005336.2-201ENST00000593183 939 ntBASIC19.34■□□□□ 0.69
SPTLC1O15269 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.34■□□□□ 0.69
SPTLC1O15269 AC093677.2-201ENST00000600169 1863 ntBASIC19.34■□□□□ 0.69
SPTLC1O15269 AC135776.1-201ENST00000319817 2481 ntBASIC19.34■□□□□ 0.69
SPTLC1O15269 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 AC009113.1-201ENST00000570267 2443 ntBASIC19.34■□□□□ 0.69
SPTLC1O15269 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SPTLC1O15269 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.34■□□□□ 0.69
SPTLC1O15269 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPTLC1O15269 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
SPTLC1O15269 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
SPTLC1O15269 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.33■□□□□ 0.69
SPTLC1O15269 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SPTLC1O15269 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SPTLC1O15269 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms