Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.75■■□□□ 1.07
SEMA3EO15041 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.75■■□□□ 1.07
SEMA3EO15041 AC022898.2-201ENST00000616822 1312 ntBASIC21.75■■□□□ 1.07
SEMA3EO15041 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SEMA3EO15041 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SEMA3EO15041 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEMA3EO15041 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEMA3EO15041 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
SEMA3EO15041 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SEMA3EO15041 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.74■■□□□ 1.07
SEMA3EO15041 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.74■■□□□ 1.07
SEMA3EO15041 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEMA3EO15041 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
SEMA3EO15041 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEMA3EO15041 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEMA3EO15041 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEMA3EO15041 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEMA3EO15041 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.74■■□□□ 1.07
SEMA3EO15041 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.74■■□□□ 1.07
SEMA3EO15041 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SEMA3EO15041 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.74■■□□□ 1.07
SEMA3EO15041 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
SEMA3EO15041 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
SEMA3EO15041 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.74■■□□□ 1.07
SEMA3EO15041 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.74■■□□□ 1.07
SEMA3EO15041 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.74■■□□□ 1.07
SEMA3EO15041 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SEMA3EO15041 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SEMA3EO15041 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEMA3EO15041 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.74■■□□□ 1.07
SEMA3EO15041 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
SEMA3EO15041 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SEMA3EO15041 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SEMA3EO15041 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.73■■□□□ 1.07
SEMA3EO15041 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SEMA3EO15041 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SEMA3EO15041 WIZP1-201ENST00000531444 2299 ntBASIC21.73■■□□□ 1.07
SEMA3EO15041 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.73■■□□□ 1.07
SEMA3EO15041 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.73■■□□□ 1.07
SEMA3EO15041 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.73■■□□□ 1.07
SEMA3EO15041 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SEMA3EO15041 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SEMA3EO15041 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SEMA3EO15041 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SEMA3EO15041 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SEMA3EO15041 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SEMA3EO15041 FAM220CP-201ENST00000395253 831 ntBASIC21.73■■□□□ 1.07
SEMA3EO15041 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
SEMA3EO15041 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SEMA3EO15041 ABCD1P5-201ENST00000445663 754 ntBASIC21.73■■□□□ 1.07
SEMA3EO15041 FGFR3P6-201ENST00000457012 610 ntBASIC21.73■■□□□ 1.07
SEMA3EO15041 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.73■■□□□ 1.07
SEMA3EO15041 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SEMA3EO15041 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.73■■□□□ 1.07
SEMA3EO15041 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.73■■□□□ 1.07
SEMA3EO15041 AP001269.4-201ENST00000609611 512 ntBASIC21.73■■□□□ 1.07
SEMA3EO15041 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.73■■□□□ 1.07
SEMA3EO15041 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.73■■□□□ 1.07
SEMA3EO15041 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SEMA3EO15041 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SEMA3EO15041 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.73■■□□□ 1.07
SEMA3EO15041 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SEMA3EO15041 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SEMA3EO15041 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SEMA3EO15041 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SEMA3EO15041 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SEMA3EO15041 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SEMA3EO15041 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SEMA3EO15041 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.72■■□□□ 1.07
SEMA3EO15041 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.72■■□□□ 1.07
SEMA3EO15041 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SEMA3EO15041 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
SEMA3EO15041 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SEMA3EO15041 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.72■■□□□ 1.07
SEMA3EO15041 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.72■■□□□ 1.07
SEMA3EO15041 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.72■■□□□ 1.07
SEMA3EO15041 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 HLA-A-201ENST00000376802 1334 ntBASIC21.72■■□□□ 1.07
SEMA3EO15041 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.72■■□□□ 1.07
SEMA3EO15041 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SEMA3EO15041 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.72■■□□□ 1.07
SEMA3EO15041 AP005117.1-201ENST00000584346 1413 ntBASIC21.72■■□□□ 1.07
SEMA3EO15041 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SEMA3EO15041 AL138781.2-201ENST00000617896 1843 ntBASIC21.71■■□□□ 1.07
SEMA3EO15041 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SEMA3EO15041 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.71■■□□□ 1.07
SEMA3EO15041 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms