Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.09■□□□□ 0.49
CFAP99D6REC4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 AC099343.3-201ENST00000605834 2503 ntBASIC18.09■□□□□ 0.49
CFAP99D6REC4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CFAP99D6REC4 AL391807.1-203ENST00000604392 2365 ntBASIC18.09■□□□□ 0.49
CFAP99D6REC4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.09■□□□□ 0.49
CFAP99D6REC4 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.09■□□□□ 0.49
CFAP99D6REC4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.09■□□□□ 0.49
CFAP99D6REC4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.09■□□□□ 0.49
CFAP99D6REC4 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.09■□□□□ 0.49
CFAP99D6REC4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 AL133373.2-201ENST00000623187 2828 ntBASIC18.09■□□□□ 0.49
CFAP99D6REC4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CFAP99D6REC4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.09■□□□□ 0.49
CFAP99D6REC4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CFAP99D6REC4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CFAP99D6REC4 AC009113.1-201ENST00000570267 2443 ntBASIC18.09■□□□□ 0.49
CFAP99D6REC4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CFAP99D6REC4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CFAP99D6REC4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CFAP99D6REC4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.08■□□□□ 0.49
CFAP99D6REC4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CFAP99D6REC4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CFAP99D6REC4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CFAP99D6REC4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CFAP99D6REC4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CFAP99D6REC4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CFAP99D6REC4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CFAP99D6REC4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CFAP99D6REC4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP99D6REC4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP99D6REC4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP99D6REC4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP99D6REC4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP99D6REC4 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.08■□□□□ 0.48
CFAP99D6REC4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP99D6REC4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP99D6REC4 KRT18P38-201ENST00000449496 1282 ntBASIC18.08■□□□□ 0.48
CFAP99D6REC4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP99D6REC4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP99D6REC4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP99D6REC4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP99D6REC4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP99D6REC4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 AC104581.1-202ENST00000635932 2618 ntBASIC18.08■□□□□ 0.48
CFAP99D6REC4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CFAP99D6REC4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 PKD1P1-201ENST00000458669 6805 ntBASIC18.08■□□□□ 0.48
CFAP99D6REC4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.08■□□□□ 0.48
CFAP99D6REC4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 LINC01311-201ENST00000565162 1445 ntBASIC18.07■□□□□ 0.48
CFAP99D6REC4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP99D6REC4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP99D6REC4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.07■□□□□ 0.48
CFAP99D6REC4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP99D6REC4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP99D6REC4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP99D6REC4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 ESPNP-201ENST00000270691 2015 ntBASIC18.07■□□□□ 0.48
CFAP99D6REC4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP99D6REC4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 AL671277.2-201ENST00000458060 996 ntBASIC18.07■□□□□ 0.48
CFAP99D6REC4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.07■□□□□ 0.48
CFAP99D6REC4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP99D6REC4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP99D6REC4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP99D6REC4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms