Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 DNAJB3-201ENST00000446806 729 ntBASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 AC034105.1-201ENST00000563488 319 ntBASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 AC093503.3-201ENST00000624917 2352 ntBASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.41■□□□□ 0.38
TRABD2BA6NFA1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 TP73-AS1-210ENST00000637775 1455 ntBASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRABD2BA6NFA1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRABD2BA6NFA1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
TRABD2BA6NFA1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 AC092910.1-201ENST00000482027 1129 ntBASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 AC021087.4-201ENST00000563761 564 ntBASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 AP001269.4-201ENST00000609611 512 ntBASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 AC134684.3-201ENST00000641758 218 ntBASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 HLA-J-201ENST00000462773 1622 ntBASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRABD2BA6NFA1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRABD2BA6NFA1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRABD2BA6NFA1 KRT8P32-201ENST00000512863 1461 ntBASIC17.38■□□□□ 0.37
TRABD2BA6NFA1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRABD2BA6NFA1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms