Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 TP73-AS1-210ENST00000637775 1455 ntBASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3FA6NER0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.02■□□□□ 0.47
TBC1D3FA6NER0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TBC1D3FA6NER0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
TBC1D3FA6NER0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.02■□□□□ 0.47
TBC1D3FA6NER0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TBC1D3FA6NER0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TBC1D3FA6NER0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TBC1D3FA6NER0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TBC1D3FA6NER0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 MRPL3P1-201ENST00000400109 1033 ntBASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 KRT18P65-201ENST00000439811 1286 ntBASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 AC009533.2-201ENST00000543664 586 ntBASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 SLC25A6P4-201ENST00000586535 553 ntBASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.01■□□□□ 0.47
TBC1D3FA6NER0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 CCS-201ENST00000310190 942 ntTSL 5 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 AC106795.1-205ENST00000512851 1056 ntBASIC18■□□□□ 0.47
TBC1D3FA6NER0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 AC126763.1-201ENST00000552015 2118 ntBASIC18■□□□□ 0.47
TBC1D3FA6NER0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TBC1D3FA6NER0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TBC1D3FA6NER0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3FA6NER0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3FA6NER0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3FA6NER0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.99■□□□□ 0.47
TBC1D3FA6NER0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.99■□□□□ 0.47
TBC1D3FA6NER0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3FA6NER0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TBC1D3FA6NER0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.99■□□□□ 0.47
TBC1D3FA6NER0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TBC1D3FA6NER0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.99■□□□□ 0.47
TBC1D3FA6NER0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.99■□□□□ 0.47
TBC1D3FA6NER0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms