Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV5A0A0B4J249 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 AC034236.2-201ENST00000606662 1610 ntBASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 SDHAP2-201ENST00000455183 2001 ntBASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 AC084018.2-201ENST00000613093 2607 ntBASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV5A0A0B4J249 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 ESRRAP1-201ENST00000400596 1257 ntBASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 MIR6786-201ENST00000616843 113 ntBASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV5A0A0B4J249 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV5A0A0B4J249 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms