Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 RCC2P6-201ENST00000526625 1557 ntBASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 UNC93B2-201ENST00000285383 730 ntBASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 FAM207BP-201ENST00000447172 505 ntBASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 SNORA78-201ENST00000459373 127 ntBASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AC116562.2-201ENST00000507042 360 ntBASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PRSS44-201ENST00000515154 1146 ntBASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AP003071.4-201ENST00000562276 1284 ntBASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.9□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 B3GAT3P1-201ENST00000471720 806 ntBASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 Z85996.1-201ENST00000494644 937 ntBASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 AC130371.2-201ENST00000619443 611 ntBASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 GNAS-203ENST00000306120 1878 ntBASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV8-3A0A0A6YYJ7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms