Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 AL356488.2-201ENST00000602755 427 ntBASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 Z83851.2-201ENST00000609564 659 ntBASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 AC008735.5-201ENST00000623544 497 ntBASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC187A0A096LP49 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 AC034105.1-201ENST00000563488 319 ntBASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 AC025062.2-201ENST00000605477 670 ntBASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 AL691403.2-201ENST00000618460 490 ntBASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC187A0A096LP49 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 AC112698.1-201ENST00000510299 916 ntBASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 RNA5SP415-201ENST00000517246 115 ntBASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC187A0A096LP49 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms