Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 AC022616.5-201ENST00000518796 181 ntBASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 ZNF815P-204ENST00000434898 1737 ntBASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
LINC01558Q9Y6Z2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC01558Q9Y6Z2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms