Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 MRPL3P1-201ENST00000400109 1033 ntBASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 AC009154.2-201ENST00000621177 724 ntBASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1G3Q9Y6M4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 HLA-A-201ENST00000376802 1334 ntBASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 AC020763.4-201ENST00000623414 4170 ntBASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 AL022342.1-201ENST00000400363 863 ntBASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1G3Q9Y6M4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 AC096582.2-201ENST00000510860 516 ntBASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 AL049812.1-201ENST00000432563 2267 ntBASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1G3Q9Y6M4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms