Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DNMT3AQ9Y6K1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DNMT3AQ9Y6K1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
DNMT3AQ9Y6K1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
DNMT3AQ9Y6K1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DNMT3AQ9Y6K1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DNMT3AQ9Y6K1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
DNMT3AQ9Y6K1 LINC00602-201ENST00000629776 2065 ntBASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DNMT3AQ9Y6K1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 KRT18P1-202ENST00000452408 1331 ntBASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 AP002383.4-201ENST00000442518 975 ntBASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 AC068472.1-201ENST00000474589 881 ntBASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 AL353801.3-201ENST00000609898 542 ntBASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 AC093458.2-201ENST00000623150 629 ntBASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 AC124864.1-201ENST00000623408 392 ntBASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DNMT3AQ9Y6K1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 AC246785.2-201ENST00000432512 513 ntBASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 MIR3180-1-201ENST00000580374 94 ntBASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 MIR3180-3-201ENST00000584616 94 ntBASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 AL592071.1-201ENST00000611956 408 ntBASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.74■□□□□ 0.43
DNMT3AQ9Y6K1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 AC022898.2-201ENST00000616822 1312 ntBASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNMT3AQ9Y6K1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms