Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.36■□□□□ 0.53
RAI2Q9Y5P3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAI2Q9Y5P3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 AL096828.2-201ENST00000567259 1965 ntBASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
RAI2Q9Y5P3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 AC135050.7-201ENST00000624508 2218 ntBASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 IGHGP-201ENST00000390555 1178 ntBASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 FDX1P1-201ENST00000449115 551 ntBASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 AC113404.2-201ENST00000507884 177 ntBASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 RNF126P1-202ENST00000569893 925 ntBASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.34■□□□□ 0.53
RAI2Q9Y5P3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.33■□□□□ 0.53
RAI2Q9Y5P3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.33■□□□□ 0.53
RAI2Q9Y5P3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAI2Q9Y5P3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RAI2Q9Y5P3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RAI2Q9Y5P3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAI2Q9Y5P3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAI2Q9Y5P3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAI2Q9Y5P3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAI2Q9Y5P3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 AC005332.3-201ENST00000589904 676 ntBASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 AC138932.1-201ENST00000534164 6830 ntBASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAI2Q9Y5P3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 HCG11-201ENST00000411553 5696 ntBASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms