Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 AC233702.3-201ENST00000578656 1387 ntBASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLDN16Q9Y5I7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 TOB2P1-201ENST00000469761 992 ntBASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 AC005336.2-201ENST00000593183 939 ntBASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 AC092329.2-201ENST00000598402 547 ntBASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN16Q9Y5I7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN16Q9Y5I7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 IGHV3-47-201ENST00000425060 335 ntBASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 AC246785.2-201ENST00000432512 513 ntBASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 HCG4P8-203ENST00000443049 980 ntBASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 AC112698.1-201ENST00000510299 916 ntBASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CLDN16Q9Y5I7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms